PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G230600.1.p
Common NamePRUPE_ppa018799mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 364aa    MW: 41370.7 Da    PI: 4.4684
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G230600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.25.4e-2281341128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkat 86 
                         lp+Gf FhP+d++l+ +yL++kv gk+++    ++++++y + ePw++ k + +      +++yfF++ ++   +g+r +r++ +g W+  
  Prupe.4G230600.1.p   8 LPVGFYFHPKDSDLLGYYLHNKVFGKPMKY--EVPKINLYGTsEPWKIWKDFGGdgleIGEDLYFFTTLKT---KGTRVSRKAGNGCWHGE 93 
                         79*************************999..599***998769****864444212124577***99876...589************98 PP

                 NAM  87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                          + k +  k ++++ g  + + +   + ++ ++  W+mhey+l
  Prupe.4G230600.1.p  94 NSAKVLDPKnEQKVLGFSRRFHYK--NPKSDQNGCWIMHEYSL 134
                         876555544344556777776665..66666799*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.19E-236163IPR003441NAC domain
PROSITE profilePS5100527.238164IPR003441NAC domain
PfamPF023657.3E-189134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MGPCAVDLPV GFYFHPKDSD LLGYYLHNKV FGKPMKYEVP KINLYGTSEP WKIWKDFGGD  60
GLEIGEDLYF FTTLKTKGTR VSRKAGNGCW HGENSAKVLD PKNEQKVLGF SRRFHYKNPK  120
SDQNGCWIMH EYSLKDYPSM PKSKNSSVSD DDGDQLVLCR IRKNDQKLHK NERKRKFKSA  180
AEDHGIDDAP VQSKSKIQKI NIDDQDPIGL TSHEPEFVTN PIGLTQSNHQ PEMIDDNQLL  240
GDDFDEALNI AFSYLDGPTI IDNNTTPQMQ SYSSMLLCAE REEMGNTPYT DHETECHTSQ  300
SFFTGSEFIE VTDDIGFGTS EETSHEYLDI DDQIAQINMS EPDYLQLDDH VFEMSPFDDD  360
DPQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-11616113165Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G230600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007212719.10.0NAC domain-containing protein 2
TrEMBLM5WX440.0M5WX44_PRUPE; Uncharacterized protein
STRINGEMJ139180.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-17NAC-like, activated by AP3/PI