PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G302500.1.p | ||||||||
Common Name | PRUPE_ppa025042mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 393aa MW: 43637.2 Da PI: 4.8619 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.6 | 7.9e-31 | 231 | 289 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+ dp+++++tY+g+H+h+ Prupe.2G302500.1.p 231 ADLWAWRKYGQKPIKGSPHPRNYYRCSSSkGCSARKQVERSTADPNIFVVTYTGDHTHP 289 699************************998****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.7E-31 | 217 | 291 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 32.891 | 225 | 291 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.7E-26 | 226 | 291 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.8E-38 | 230 | 290 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.9E-26 | 232 | 289 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0007263 | Biological Process | nitric oxide mediated signal transduction | ||||
GO:0009739 | Biological Process | response to gibberellin | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 393 aa Download sequence Send to blast |
MADDWDLYAV VRSCKSATHA TTTNTSAAGA PTNPITPPSA EEEYSFWEWL KSEEETDPLF 60 SFPNLLEPRA NAFQELQQFY EPLLPNPTTT NNPSTNNNTF VPPIIPNSPI ISDFGGSASS 120 GQHHLQQQQH HFLPTNTPAS PHFNPAIFPP GFGEFHGQQQ PLLLPKPETQ ILPQQLPTQQ 180 GFMRPRAMVP ALPPPLPRAP FTMPINSPRP RKRKCQQKRQ VCQVSAENLS ADLWAWRKYG 240 QKPIKGSPHP RNYYRCSSSK GCSARKQVER STADPNIFVV TYTGDHTHPR PTHRNSLAGS 300 TRNKLSAMAG QNQPINNDSG SPPAQADQDV VANNVNSDNS LDKENEELDE DEEERDENEI 360 EDEDVEEDDV LIPNTAMSDE IFLGLKQLGC TS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 4e-19 | 231 | 292 | 17 | 80 | Disease resistance protein RRS1 |
5w3x_D | 4e-19 | 231 | 292 | 17 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00561 | DAP | Transfer from AT5G52830 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G302500.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020414064.1 | 0.0 | LOW QUALITY PROTEIN: probable WRKY transcription factor 27 | ||||
TrEMBL | A0A251QNR5 | 0.0 | A0A251QNR5_PRUPE; Uncharacterized protein | ||||
STRING | EMJ20840 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6794 | 32 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52830.1 | 2e-46 | WRKY DNA-binding protein 27 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G302500.1.p |
Entrez Gene | 18785529 |