PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G286100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 262aa MW: 29829.9 Da PI: 5.2365 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.3 | 1.1e-07 | 90 | 136 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +Er+RR+ + + Lr+llP+ + ++K s +e +Av+YI ++ Prupe.2G286100.1.p 90 RDNERQRRQLMAVLNASLRSLLPHEF--IKGKRSISEHMNEAVNYITHM 136 679*********************65..******************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 8.52E-6 | 82 | 141 | No hit | No description |
SuperFamily | SSF47459 | 1.44E-8 | 83 | 152 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 11.103 | 84 | 136 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.7E-6 | 88 | 155 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 4.1E-5 | 90 | 136 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence Send to blast |
MFPNFYHPND QSKDLEFQIS SNDPHQEDMM QIEDLVPGHE VLPEESDPSH NNKKMGKGKQ 60 QQQHMILFAH PDNNEANPSD VKVERKIVRR DNERQRRQLM AVLNASLRSL LPHEFIKGKR 120 SISEHMNEAV NYITHMKRKI QELNAKKEKL RRLYEYDSSA QEFGLENETL GLDLVNSVTN 180 IMVGPTCLGG VEVVISSSCS EDEGLPLSRV LKLLLAEGLC VVECASTRVN ERVFHTIQCE 240 VDDLECVLDL SELQLKLNLQ I* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 137 | 152 | RKIQELNAKKEKLRRL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G286100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007219873.2 | 0.0 | transcription factor bHLH36 | ||||
TrEMBL | A0A251QR54 | 0.0 | A0A251QR54_PRUPE; Uncharacterized protein | ||||
STRING | XP_008234325.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF792 | 33 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 3e-39 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G286100.1.p |