PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G230000.2.p
Common NamePRUPE_ppa009578mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 264aa    MW: 29631.5 Da    PI: 9.4838
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G230000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.40.000141521911155
                         HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         rR +++ +++  L++l+ +      +K + a++L++A  YI  Lq
  Prupe.2G230000.2.p 152 RRSQKLSDKITVLQKLVSPY-----GKTDTASVLQEASIYIMLLQ 191
                         7999**************99.....9***************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.487141190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-8152201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-5152196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.50E-4152195No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MSNWDAQVNM NRRLGFYMGS KAFESDNQNS RAGDDFSLPL PLPLQSSSLL AYQPAYPSGA  60
FRYHDGVSQQ PVLLDKKISA PQFEADFQAI QNARKRPIEV DDLGGLVGDK TALNEWNQNK  120
RSKVTNSQQQ WHQQFQETSM QQQNNKLHAP VRRSQKLSDK ITVLQKLVSP YGKTDTASVL  180
QEASIYIMLL QEQIQQNLLR MFSSSYKNAA VLHTQECGSR QVLDLRSKGL CLVPVSVTQK  240
VTMEEGVDHA ATSRKIVIAN NLY*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.61410.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G230000.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020412329.10.0transcription factor bHLH111 isoform X3
TrEMBLA0A251QKG30.0A0A251QKG3_PRUPE; Uncharacterized protein
STRINGEMJ199740.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21340.12e-20bHLH family protein