PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G230000.10.p | ||||||||
Common Name | PRUPE_ppa009578mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 286aa MW: 32159.4 Da PI: 9.4479 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.3 | 0.00016 | 175 | 214 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rR +++ +++ L++l+ + +K + a++L++A YI Lq Prupe.2G230000.10.p 175 RRSQKLSDKITVLQKLVSPY-----GKTDTASVLQEASIYIMLLQ 214 7999**************99.....9***************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.487 | 164 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.18E-8 | 175 | 223 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.28E-4 | 175 | 218 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 8.0E-6 | 175 | 222 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence Send to blast |
MRNALLPSVP FHLYNFGNNI EVQMSNWDAQ VNMNRRLGFY MGSKAFESDN QNSRAGDDFS 60 LPLPLPLQSS SLLAYQPAYP SGAFRYHDGV SQQPVLLDKK ISAPQFEADF QAIQNARKRP 120 IEVDDLGGLV GDKTALNEWN QNKRSKVTNS QQQWHQQFQE TSMQQQNNKL HAPVRRSQKL 180 SDKITVLQKL VSPYGKTDTA SVLQEASIYI MLLQEQIQNL LRMFSSSYKN AAVLHTQECG 240 SRQVLDLRSK GLCLVPVSVT QKVTMEEGVD HAATSRKIVI ANNLY* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.6141 | 0.0 | fruit |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G230000.10.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007218775.1 | 0.0 | transcription factor bHLH111 isoform X2 | ||||
Refseq | XP_020412328.1 | 0.0 | transcription factor bHLH111 isoform X2 | ||||
Refseq | XP_020412329.1 | 0.0 | transcription factor bHLH111 isoform X3 | ||||
TrEMBL | A0A251QK86 | 0.0 | A0A251QK86_PRUPE; Uncharacterized protein | ||||
STRING | EMJ19974 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19500.1 | 3e-20 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G230000.10.p |
Entrez Gene | 18785148 |