PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G229300.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 178aa MW: 20790.7 Da PI: 9.077 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 40.3 | 6.9e-13 | 124 | 170 | 5 | 50 |
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkv.kgLtlehvkSHL 50 Wtp He veav qLGG kAt k il+l++ gLt+e v HL Prupe.2G229300.2.p 124 SWTPVYHEDLVEAVIQLGGLGKATAKGILKLLENhRGLTVEAVSYHL 170 7******************************97527**********9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 7.4E-10 | 123 | 170 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence Send to blast |
MMEVDGENHD EGLERNYQRR PQTRRRSRVE AIEWTLEHHK QFVDTMNRLY LGDLTVRTPR 60 RAILIVELMN NEALRLIPRS TLLHHIGLFQ RFQSNQKANA HSVLTRDFER LNINKEEKQD 120 LSFSWTPVYH EDLVEAVIQL GGLGKATAKG ILKLLENHRG LTVEAVSYHL FRCSFNF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 19 | 28 | RPQTRRRSRV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G229300.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008227545.1 | 8e-58 | PREDICTED: uncharacterized protein LOC103327046 | ||||
TrEMBL | A0A251QNB5 | 1e-128 | A0A251QNB5_PRUPE; Uncharacterized protein | ||||
STRING | XP_008227545.1 | 3e-57 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G29000.3 | 2e-09 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G229300.2.p |