PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G202700.5.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 327aa MW: 37537 Da PI: 4.2575 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 78.7 | 1.3e-24 | 10 | 85 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ew+fFs rd ky++++r+nrat +g Wk tgk++ + ++ +++++g+k+t++fy+ pk++kt+Wvmhey+l Prupe.2G202700.5.p 10 HDMEWFFFSLRDYKYTNSNRSNRATPHGSWKITGKERMIRARgSNAVIGTKRTMTFYERGVPKSKKTNWVMHEYNL 85 5679*************************************9666779**************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 32.686 | 1 | 109 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.3E-13 | 8 | 85 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.96E-29 | 9 | 107 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence Send to blast |
MFTEQDSPYH DMEWFFFSLR DYKYTNSNRS NRATPHGSWK ITGKERMIRA RGSNAVIGTK 60 RTMTFYERGV PKSKKTNWVM HEYNLFESEA SPDPQLAERD FVLCRTKKNP DKKDTSVFAE 120 GEPSSYNLYN CEDEAAADVT PESQDHSPST LQSPAYIELG DVLQVNVLHE DCKDMQSPFG 180 DNDYSVTDKN YFSTFDEGEP HGFTVSDIEN EVACDMSQEQ AQDYYSFTLP SPIYSELGSV 240 PHFDVYNNEW KSTYANFENQ TTDERISEEC PQPKENLRSI LSASQLEDYT SQTLMDTEEY 300 QMRPCEIGRE GAAGMNWEGS FFNIFP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 7e-19 | 9 | 109 | 68 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-19 | 9 | 109 | 68 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-19 | 9 | 109 | 68 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-19 | 9 | 109 | 68 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-19 | 9 | 109 | 71 | 168 | NAC domain-containing protein 19 |
3swm_B | 7e-19 | 9 | 109 | 71 | 168 | NAC domain-containing protein 19 |
3swm_C | 7e-19 | 9 | 109 | 71 | 168 | NAC domain-containing protein 19 |
3swm_D | 7e-19 | 9 | 109 | 71 | 168 | NAC domain-containing protein 19 |
3swp_A | 7e-19 | 9 | 109 | 71 | 168 | NAC domain-containing protein 19 |
3swp_B | 7e-19 | 9 | 109 | 71 | 168 | NAC domain-containing protein 19 |
3swp_C | 7e-19 | 9 | 109 | 71 | 168 | NAC domain-containing protein 19 |
3swp_D | 7e-19 | 9 | 109 | 71 | 168 | NAC domain-containing protein 19 |
4dul_A | 7e-19 | 9 | 109 | 68 | 165 | NAC domain-containing protein 19 |
4dul_B | 7e-19 | 9 | 109 | 68 | 165 | NAC domain-containing protein 19 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G202700.5.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020411931.1 | 0.0 | NAC domain-containing protein 83 isoform X4 | ||||
TrEMBL | A0A251QIP7 | 0.0 | A0A251QIP7_PRUPE; Uncharacterized protein | ||||
STRING | XP_008244181.1 | 1e-148 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46590.1 | 5e-26 | NAC domain containing protein 96 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G202700.5.p |