PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G114800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 102aa MW: 11416.4 Da PI: 3.8392 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.8 | 4.4e-07 | 7 | 55 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47 WT eE + + a++ + + W++++ ++ g++ q+k+++ + Prupe.2G114800.1.p 7 EWTREENKAFEIAIATYNIEciekgEWEKVSLSVP-GKSIDQIKLHFMHL 55 7****************999***************.**********9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 6.06E-8 | 6 | 60 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 5.59E-5 | 7 | 56 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.9E-4 | 7 | 56 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50090 | 6.226 | 8 | 56 | IPR017877 | Myb-like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence Send to blast |
MAGAIDEWTR EENKAFEIAI ATYNIECIEK GEWEKVSLSV PGKSIDQIKL HFMHLLMDVE 60 AIESDQGPLP DYEYDEDEND GDDGNDGDHG DNKEKEMSIV P* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G114800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A251QEF4 | 2e-67 | A0A251QEF4_PRUPE; Uncharacterized protein | ||||
STRING | XP_004308717.1 | 3e-23 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF17533 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49010.1 | 4e-14 | MYB family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G114800.1.p |