PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G532700.2.p
Common NamePRUPE_ppa002943mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 555aa    MW: 58307.6 Da    PI: 5.9712
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G532700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding292.4e-09143188145
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHH CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwq 45 
                         r++W++ Ed+ l+ +v+++G g+W+ I r      Rt++q+  rw 
  Prupe.1G532700.2.p 143 RKKWSEAEDLELIAGVRRYGEGNWANILRGDFkGERTANQLSQRWK 188
                         789************************98522359**********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.0E-14138195IPR009057Homeodomain-like
PROSITE profilePS5129416.229138195IPR017930Myb domain
SuperFamilySSF466894.86E-12139192IPR009057Homeodomain-like
SMARTSM007172.6E-8142193IPR001005SANT/Myb domain
PfamPF002491.1E-7143189IPR001005SANT/Myb domain
CDDcd116604.45E-14144192No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    Send to blast
MLWRHLAYSE AFVDNFDNGA QPVDDDSDLE HELEAFPAVI GEDSTEAAAC VKVLMASGLP  60
SDSTHRSGAT VEAPLTINIP NGQPSRTHQN SQPPCSMQGM NITVPVSVQK QPLLAMTTST  120
GATAEGGDAN GSASNNMAPR KKRKKWSEAE DLELIAGVRR YGEGNWANIL RGDFKGERTA  180
NQLSQRWKYI RKHHHQDLNV GGNSSNKLSE AQLATRHAMS LALNMPSITA NTIGTAGTNT  240
HSKFGGTNAT TNSLPSTAAE EELQSQQGLK PAKPYQMGLL GSTSKSQLTS KKTLTKPNSN  300
TDGMVRATAV AAGARIASPS DAASLLKAAQ AKNAVHVLPT GGSSIQSSLP GSMRTHPEPH  360
PNLHYMHTGL AATPVSTPLS TAVTPSATHP GSLKALPQTS QHAPTNSTLL SKQIKDVSCS  420
LDSELGCTPT EQVQDGAVIS ENGQNEEGQK DKVDSPDQKA ELKNLSTSAE NLVGSLDIKG  480
DETDNIAGIG VQSEERQSAK DNETLCSLKG DDPFAADSCE NQSASEQQIG LVSIVGDGCN  540
GKQVLGKEET GIKI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140144KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G532700.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007222017.10.0uncharacterized protein LOC18793323
TrEMBLM5XCP60.0M5XCP6_PRUPE; Uncharacterized protein
STRINGEMJ232160.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.14e-61MYB_related family protein