PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G532600.4.p
Common NamePRUPE_ppa1027142mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 577aa    MW: 60699.9 Da    PI: 6.7482
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G532600.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.27.8e-08143187144
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 
                         r++W++ Ed  l+ av++ G g+W+ I r    g  Rt+ q+  rw
  Prupe.1G532600.4.p 143 RKKWSEAEDFELIAAVQKCGEGNWANILRadFKG-DRTAGQLSQRW 187
                         789************************8721344.78888887777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.8E-12136192IPR009057Homeodomain-like
PROSITE profilePS5129415.474138195IPR017930Myb domain
SuperFamilySSF466899.72E-12139192IPR009057Homeodomain-like
SMARTSM007178.3E-9142193IPR001005SANT/Myb domain
PfamPF002492.3E-6143187IPR001005SANT/Myb domain
CDDcd116601.38E-13144192No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    Send to blast
MLWRHLAYRE ALVDKFDNGS QPLDDDSDLE YELEAFPAVC GEASTEAAAC VKVLIASGLP  60
SDSSHRNGTT VEAPLTINIP NGQPSRTHEN SEPTCSMQGK NITVPVSVKK QPLPSATTSS  120
VATADGGDAN GSASNSMAPR KKRKKWSEAE DFELIAAVQK CGEGNWANIL RADFKGDRTA  180
GQLSQRWAII KKRNQELNLG GNSSGKLSEA QLAARHSLSV ALNMPNLTAK TIGTAGTNAH  240
NKFARKVATS NPVLTTGAKA EPQSQQDLKP TKKPYQMELL GSTTKSQVTS KNTLTKPNCN  300
DDDIVRAIAV AAGARIASPS DAASLLKAAQ AKNAVHIMPT SGSIQSSLPG GMSTHSEPHP  360
NLHMRTGLAG ITLSTPPPTD VTPSAVHPGS SKALPPMSQP TPTNGTLLSR QIKGVSCSLD  420
AKLPSKQEVR TEEGSVIAEL GCTPIVLAQD EAVISRNGQD EQVKDDKVDS PNQKADLKIL  480
ISNAENAVSS LNIERDETHH KAVISVQGEQ RQSAKDNEVV CSLIGGGDPS AVDSSEKPSS  540
TEKQTDLLGT VTDGCNGKHV LSKEEAGIKI NGEHEG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140144KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G532600.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020410506.10.0uncharacterized protein LOC18788538 isoform X2
TrEMBLA0A251RH740.0A0A251RH74_PRUPE; Uncharacterized protein
STRINGEMJ257900.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.21e-52MYB_related family protein