PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G532600.2.p
Common NamePRUPE_ppa1027142mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 634aa    MW: 67404.5 Da    PI: 7.6241
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G532600.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding248.8e-08200244144
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 
                         r++W++ Ed  l+ av++ G g+W+ I r    g  Rt+ q+  rw
  Prupe.1G532600.2.p 200 RKKWSEAEDFELIAAVQKCGEGNWANILRadFKG-DRTAGQLSQRW 244
                         789************************8721344.78888887777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.0E-12193249IPR009057Homeodomain-like
PROSITE profilePS5129415.474195252IPR017930Myb domain
SuperFamilySSF466891.08E-11196249IPR009057Homeodomain-like
SMARTSM007178.3E-9199250IPR001005SANT/Myb domain
PfamPF002492.6E-6200244IPR001005SANT/Myb domain
CDDcd116601.65E-13201249No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 634 aa     Download sequence    Send to blast
MFYHRRRYSH SLTKGRYTAT TVLALLQEVA HWPEAKIDWI RLVAKTSTGI SNAREYQMLW  60
RHLAYREALV DKFDNGSQPL DDDSDLEYEL EAFPAVCGEA STEAAACVKV LIASGLPSDS  120
SHRNGTTVEA PLTINIPNGQ PSRTHENSEP TCSMQGKNIT VPVSVKKQPL PSATTSSVAT  180
ADGGDANGSA SNSMAPRKKR KKWSEAEDFE LIAAVQKCGE GNWANILRAD FKGDRTAGQL  240
SQRWAIIKKR NQELNLGGNS SGKLSEAQLA ARHSLSVALN MPNLTAKTIG TAGTNAHNKF  300
ARKVATSNPV LTTGAKAEPQ SQQDLKPTKK PYQMELLGST TKSQVTSKNT LTKPNCNDDD  360
IVRAIAVAAG ARIASPSDAA SLLKAAQAKN AVHIMPTSGS IQSSLPGGMS THSEPHPNLH  420
MRTGLAGITL STPPPTDVTP SAVHPGSSKA LPPMSQPTPT NGTLLSRQIK GVSCSLDAKL  480
PSKQEVRTEE GSVIAELGCT PIVLAQDEAV ISRNGQDEQV KDDKVDSPNQ KADLKILISN  540
AENAVSSLNI ERDETHHKAV ISVQGEQRQS AKDNEVVCSL IGGGDPSAVD SSEKPSSTEK  600
QTDLLGTVTD GCNGKHVLSK EEAGIKINGE HEG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197201KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G532600.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020410506.10.0uncharacterized protein LOC18788538 isoform X2
TrEMBLA0A251RH740.0A0A251RH74_PRUPE; Uncharacterized protein
STRINGEMJ257900.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.24e-71MYB_related family protein