PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G532600.1.p
Common NamePRUPE_ppa1027142mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 642aa    MW: 68074.3 Da    PI: 6.7899
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G532600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding248.9e-08208252144
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 
                         r++W++ Ed  l+ av++ G g+W+ I r    g  Rt+ q+  rw
  Prupe.1G532600.1.p 208 RKKWSEAEDFELIAAVQKCGEGNWANILRadFKG-DRTAGQLSQRW 252
                         789************************8721344.78888887777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.1E-12201257IPR009057Homeodomain-like
PROSITE profilePS5129415.474203260IPR017930Myb domain
SuperFamilySSF466891.08E-11204257IPR009057Homeodomain-like
SMARTSM007178.3E-9207258IPR001005SANT/Myb domain
PfamPF002492.6E-6208252IPR001005SANT/Myb domain
CDDcd116601.68E-13209257No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 642 aa     Download sequence    Send to blast
MVEKTKDPKK CSITEEDTAT LLQRYTATTV LALLQEVAHW PEAKIDWIRL VAKTSTGISN  60
AREYQMLWRH LAYREALVDK FDNGSQPLDD DSDLEYELEA FPAVCGEAST EAAACVKVLI  120
ASGLPSDSSH RNGTTVEAPL TINIPNGQPS RTHENSEPTC SMQGKNITVP VSVKKQPLPS  180
ATTSSVATAD GGDANGSASN SMAPRKKRKK WSEAEDFELI AAVQKCGEGN WANILRADFK  240
GDRTAGQLSQ RWAIIKKRNQ ELNLGGNSSG KLSEAQLAAR HSLSVALNMP NLTAKTIGTA  300
GTNAHNKFAR KVATSNPVLT TGAKAEPQSQ QDLKPTKKPY QMELLGSTTK SQVTSKNTLT  360
KPNCNDDDIV RAIAVAAGAR IASPSDAASL LKAAQAKNAV HIMPTSGSIQ SSLPGGMSTH  420
SEPHPNLHMR TGLAGITLST PPPTDVTPSA VHPGSSKALP PMSQPTPTNG TLLSRQIKGV  480
SCSLDAKLPS KQEVRTEEGS VIAELGCTPI VLAQDEAVIS RNGQDEQVKD DKVDSPNQKA  540
DLKILISNAE NAVSSLNIER DETHHKAVIS VQGEQRQSAK DNEVVCSLIG GGDPSAVDSS  600
EKPSSTEKQT DLLGTVTDGC NGKHVLSKEE AGIKINGEHE G*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1205209KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G532600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020410505.10.0uncharacterized protein LOC18788538 isoform X1
TrEMBLA0A251RHU20.0A0A251RHU2_PRUPE; Uncharacterized protein
STRINGEMJ257900.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31223256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.23e-76MYB_related family protein