PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.1G508100.15.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 361aa MW: 39838.4 Da PI: 6.0582

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.1G508100.15.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.2	2.8e-11	75	114	3	42
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 ++k++rr+++NReAAr+sR RKka++++Le+ +L + Prupe.1G508100.15.p 75 SDKVQRRLEQNREAARKSRMRKKAYVQQLETSRLKLAQLE 114 79****************************8544443333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.3E-10	70	123	No hit	No description
SMART	SM00338	3.3E-5	73	133	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.0E-8	75	115	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.404	75	119	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.56E-8	77	118	No hit	No description
PROSITE pattern	PS00036	0	80	95	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.9E-26	166	239	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0042742	Biological Process	defense response to bacterium
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence Send to blast
MSYPSTQFAT SRQMGIYEPF RQVGVWKETF RGDHSSNTGA SSILEVDAGI ETKIGYVSHE 60 SLAPSGNDQE PNRSSDKVQR RLEQNREAAR KSRMRKKAYV QQLETSRLKL AQLEQELERA 120 RKQGAYVASS LGTSHMGYNG ALNSGITTFE MEYGHWVEEQ HRQNVELRNA LQDHGTDIEL 180 LRILVESGLS HYANLFRMKA DAARADAFYL LSGIWRTSVE RHFHWIGGFR PSELLNIVLP 240 QLQPLDEPQL VDFYNLRQSS QQAEDALTQG MEKLQQNLAL TIAGDQISGE IYGSQMATAL 300 EKLEALETFV GQTGGSPPAA NSAANVSNPN DSPGSSRLAC ARGILSPAAC PQFSLDCPSS 360 *

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence Send to blast

MSYPSTQFAT SRQMGIYEPF RQVGVWKETF RGDHSSNTGA SSILEVDAGI ETKIGYVSHE  60
SLAPSGNDQE PNRSSDKVQR RLEQNREAAR KSRMRKKAYV QQLETSRLKL AQLEQELERA  120
RKQGAYVASS LGTSHMGYNG ALNSGITTFE MEYGHWVEEQ HRQNVELRNA LQDHGTDIEL  180
LRILVESGLS HYANLFRMKA DAARADAFYL LSGIWRTSVE RHFHWIGGFR PSELLNIVLP  240
QLQPLDEPQL VDFYNLRQSS QQAEDALTQG MEKLQQNLAL TIAGDQISGE IYGSQMATAL  300
EKLEALETFV GQTGGSPPAA NSAANVSNPN DSPGSSRLAC ARGILSPAAC PQFSLDCPSS  360
*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269\|PubMed:12953119}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00247	DAP	Transfer from AT1G77920	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.1G508100.15.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007222089.2	0.0	transcription factor TGA7 isoform X3
Swissprot	Q93ZE2	1e-119	TGA7_ARATH; Transcription factor TGA7
TrEMBL	A0A251RG86	0.0	A0A251RG86_PRUPE; Uncharacterized protein
STRING	EMJ23288	0.0	(Prunus persica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-114	bZIP family protein

Link Out ? help Back to Top
Phytozome	Prupe.1G508100.15.p

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]