PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Prupe.1G419700.1.p | ||||||||
Common Name | PRUPE_ppa021433mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 147aa MW: 17135.3 Da PI: 10.3369 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.3 | 7e-13 | 59 | 110 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 k+ rrk +NRe+ArrsR RKk ++e L++ v L+ +N++Lk++l +++ Prupe.1G419700.1.p 59 KKLRRKKSNRESARRSRWRKKRQVEDLTNDVNWLKVQNRELKNRLGVVAQKC 110 899***************************************9998887777 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.9E-10 | 55 | 119 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-9 | 56 | 110 | No hit | No description |
PROSITE profile | PS50217 | 10.473 | 57 | 109 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.3E-11 | 59 | 110 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-10 | 59 | 110 | No hit | No description |
CDD | cd14702 | 6.52E-13 | 60 | 111 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 62 | 77 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 147 aa Download sequence Send to blast |
MLFNHEPVHF NRFECPVQET GLTTAEIQEL LSLLQEGNSA SPNSGSEDSN RAVYSVDEKK 60 LRRKKSNRES ARRSRWRKKR QVEDLTNDVN WLKVQNRELK NRLGVVAQKC HVTWRENDRL 120 TSESLALRAR LSDLHWNFVA MQMQSQ* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 62 | 79 | RKKSNRESARRSRWRKKR |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Prupe.1G419700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_007224432.2 | 1e-104 | basic leucine zipper 4 | ||||
TrEMBL | M5XJA9 | 1e-103 | M5XJA9_PRUPE; Uncharacterized protein | ||||
STRING | EMJ25631 | 1e-103 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5996 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G59530.1 | 3e-22 | basic leucine-zipper 4 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Prupe.1G419700.1.p |
Entrez Gene | 18791681 |