PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G418500.2.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 433aa    MW: 46567.6 Da    PI: 5.9781
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G418500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.3e-10274322355
                         HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Prupe.1G418500.2.p 274 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 322
                         58**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.56E-11269326No hitNo description
SuperFamilySSF474596.8E-17269338IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.485271321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16272339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-7274322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-10277327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MGGHDSEDGG FQHRNEGSLN CPSSGMSTNP LPEKVSQITM SSVSMFKPSN GADPFFGSGW  60
DPIVSLSQSD NFGGSSVVSH REFSNPPYPV ALENPGMSST SHLVQYPSDS SYVEMVPKLP  120
CFGSGSFSEM VGSFGLSECA QIANPGCAAN YNPHREGAPE RTSTIGAQSH DDRQISEEGA  180
LGSSPSGKRR KRVPESNSAF SPNKNAEGEI NKDLSGESSD YLKEQDEKKA KVEDNTAANL  240
RGKQMGKQAK ESSQSGDAKD SYIHVRARRG QATNSHSLAE RVRREKISER MRLLQELVPG  300
CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLATVNPELN IDIERILSKD ILNSRSGSGA  360
IFGFSPGISS SHPYPHGMFP GNLPSMPSSA PQFPSLPQTV LDSELQGLFH MGFDSSSAID  420
NLGQNGRLKS EL*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00135DAPTransfer from AT1G10120Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G418500.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020410190.10.0transcription factor bHLH74 isoform X2
TrEMBLA0A251RBG40.0A0A251RBG4_PRUPE; Uncharacterized protein
STRINGXP_008220406.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.15e-92bHLH family protein