PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G340500.2.p | ||||||||
Common Name | PRUPE_ppa021540mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 300aa MW: 33432.1 Da PI: 8.7245 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100 | 1.6e-31 | 20 | 73 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++F++ +e+LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+ Prupe.1G340500.2.p 20 PRLRWTPELHHCFLHSIERLGGHKKATPKLVLQLMDVKGLTISHVKSHLQMYRS 73 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.12 | 16 | 76 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 4.7E-30 | 16 | 75 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 8.06E-15 | 18 | 73 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.7E-22 | 20 | 73 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.2E-7 | 21 | 72 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence Send to blast |
MTSCSARNGA VRQYVRSKVP RLRWTPELHH CFLHSIERLG GHKKATPKLV LQLMDVKGLT 60 ISHVKSHLQM YRSMRGDLGT RQQDRSCTQP RKQLFEEHDD GCLDELNGVS FYPSSKSIRE 120 SDSQLIYSTP RRSKRARTET TSSISEGLQQ QCSQGIYETV SNPYSFDDNV LAMAQQQRGG 180 FKEPNPSALS LPQPHLHYNF NHPSSQFSLQ ESDFFKVTKP EARADADQDN EDGDCQLSLS 240 LSLHHPSSHK SKSNASSSEF SGAISSYSSS RSNYKDCSTS SSGNHRSINL NLSIALCGK* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 6e-18 | 21 | 75 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 6e-18 | 21 | 75 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 6e-18 | 21 | 75 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 6e-18 | 21 | 75 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G340500.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020410535.1 | 0.0 | putative Myb family transcription factor At1g14600 isoform X2 | ||||
TrEMBL | A0A251R793 | 0.0 | A0A251R793_PRUPE; Uncharacterized protein | ||||
STRING | XP_008220974.1 | 0.0 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02060.1 | 3e-31 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G340500.2.p |
Entrez Gene | 18792327 |