PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G234600.1.p | ||||||||
Common Name | PRUPE_ppb012237mg, PRUPE_ppb013470mg, PRUPE_ppb016085mg, PRUPE_ppb018678mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 87aa MW: 9987.39 Da PI: 7.784 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 49 | 2e-15 | 16 | 75 | 1 | 56 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd...iykvePwdLp.kkvkaeek 56 lp+GfrF Ptd+elv++yL +kv +++++++e+i+++d y+++P++L+ +k+++e+k Prupe.1G234600.1.p 16 LPVGFRFMPTDKELVTHYLMNKVFDRPVPAAEAIQDIDatqFYSTHPKNLDsTKIREEKK 75 79*************************998888888764448999*****8445544333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.54E-14 | 9 | 71 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 15.203 | 16 | 86 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.8E-8 | 17 | 67 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 87 aa Download sequence Send to blast |
MEAEHGQEAM MSSGQLPVGF RFMPTDKELV THYLMNKVFD RPVPAAEAIQ DIDATQFYST 60 HPKNLDSTKI REEKKKITEK RKERFS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G234600.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020420381.1 | 1e-42 | NAC transcription factor 29-like | ||||
TrEMBL | M5W371 | 1e-57 | M5W371_PRUPE; Uncharacterized protein | ||||
STRING | EMJ08081 | 2e-58 | (Prunus persica) | ||||
STRING | EMJ08159 | 2e-58 | (Prunus persica) | ||||
STRING | EMJ22814 | 2e-58 | (Prunus persica) | ||||
STRING | EMJ22899 | 2e-58 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14439 | 12 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.1 | 5e-09 | NAC domain containing protein 47 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G234600.1.p |
Entrez Gene | 18773088 | 18773664 | 18791176 | 18792666 |