PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G226700.3.p
Common NamePRUPE_ppa018287mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NF-YC
Protein Properties Length: 276aa    MW: 31076.8 Da    PI: 4.249
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G226700.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC391.8e-12891691897
               NF-YC  18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97 
                         + e+P +r+k+i+k d  ++++ +ea  l+s + +lf+  l+ rs   a e+kr+ +k   +  av+r   + dfl+d+ p
  Prupe.1G226700.3.p  89 RPEFPNTRVKRIMKLDRGINKVNSEALLLVSCSAQLFLEFLAERSAEVATEKKRKIVKLEHMRVAVKRHRpTSDFLLDELP 169
                         5689**************************************************************9975389*****987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF471132.42E-1538156IPR009072Histone-fold
Gene3DG3DSA:1.10.20.107.9E-1683155IPR009072Histone-fold
PfamPF008087.8E-1791154IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MAEEQNAARE EENAEQREEN AEQAEENAEQ EEENAEQADE NAEQEEDDAE QEEDNSEKAV  60
ENAAVKEKAK VAQEEENAEP IRSENSQIRP EFPNTRVKRI MKLDRGINKV NSEALLLVSC  120
SAQLFLEFLA ERSAEVATEK KRKIVKLEHM RVAVKRHRPT SDFLLDELPV PSQPSDHQPT  180
DRSSSRTVSH APAPARRDRS RSRAVSYKPA PAGTRRIDHF FRTKEIPIQT EQSLIETEEA  240
PIETEEASIE IDEAPIETDE GPIETGEGPI ETNES*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G226700.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007227235.10.0dr1-associated corepressor
TrEMBLA0A251R1V10.0A0A251R1V1_PRUPE; Uncharacterized protein
STRINGEMJ284340.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.11e-42nuclear factor Y, subunit C13