PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G125300.1.p
Common NamePRUPE_ppa007594mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 378aa    MW: 41774.4 Da    PI: 5.5191
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G125300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.82.2e-171461148
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
     Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                        rgrWT+eEde+l ++++++G g+W++ ++  g+ R++k+c++rw +yl
  Prupe.1G125300.1.p 14 RGRWTAEEDEILTNYIQLHGEGSWRSLPNNAGLLRCGKSCRLRWINYL 61
                        8*******************************99************97 PP
2Myb_DNA-binding55.11.8e-1767112148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                         rg+ T+eE+e +v++++ lG++ W+ Ia++++ gRt++++k++w+++l
  Prupe.1G125300.1.p  67 RGNITAEEEETIVKLHTALGNR-WSFIAAHLP-GRTDNEIKNYWNSHL 112
                         7999******************.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.3E-22564IPR009057Homeodomain-like
PROSITE profilePS5129415.548961IPR017930Myb domain
SuperFamilySSF466891.14E-2811108IPR009057Homeodomain-like
SMARTSM007171.4E-121363IPR001005SANT/Myb domain
PfamPF002494.7E-151461IPR001005SANT/Myb domain
CDDcd001672.11E-91661No hitNo description
PROSITE profilePS5129425.41762116IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.5E-2565116IPR009057Homeodomain-like
SMARTSM007179.7E-1666114IPR001005SANT/Myb domain
PfamPF002491.7E-1467112IPR001005SANT/Myb domain
CDDcd001673.07E-1071112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051555Biological Processflavonol biosynthetic process
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MGRAPCCEKL GLKRGRWTAE EDEILTNYIQ LHGEGSWRSL PNNAGLLRCG KSCRLRWINY  60
LRADLKRGNI TAEEEETIVK LHTALGNRWS FIAAHLPGRT DNEIKNYWNS HLSRKIYTFT  120
NLGNDYLPTI TNVGKKTAAS FKDRRAAARA NRSSIMNKNK NVLAPSPQRS QAKPQQSGTN  180
IADHVVLQLE PSARENQKGD EAIRMLGLKG SCLDSTERIN LDHCGDQKEG AELCLGNKVN  240
ITSSTVLSGD NNGEKEVLGL CECVESEIRG LESGVVDPSG NVGFKEQRED GIIMEGSITD  300
EVTKSEGRKS TSLWSSNAES GSGELYSFSS SMNSTFDDEW LSWGWAGGFE CHNELELWDE  360
GERIAWLWES GSTGEGH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C1e-221211625128MYB TRANSFORMING PROTEIN
Search in ModeBase
Function -- GeneRIF ? help Back to Top
  1. PpMYB15 (Prupe.8G270000) and PpMYBF1 (Prupe.1G125300) are functional flavonol-specific positive regulators in peach fruit.
    [PMID: 30525549]
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00598PBMTransfer from AT5G49330Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G125300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFR8285531e-120FR828553.1 Rosa hybrid cultivar mRNA for putative MYB transcription factor (myb2 gene), cultivar Yellow Island.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020410856.10.0transcription factor MYB111
TrEMBLA0A251QWC00.0A0A251QWC0_PRUPE; Uncharacterized protein
STRINGEMJ232890.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.15e-75myb domain protein 111
Publications ? help Back to Top
  1. Cao Y, et al.
    PpMYB15 and PpMYBF1 Transcription Factors Are Involved in Regulating Flavonol Biosynthesis in Peach Fruit.
    J. Agric. Food Chem., 2019. 67(2): p. 644-652
    [PMID:30525549]