 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.1G119200.1.p |
| Common Name | PRUPE_ppa015860mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
GRAS |
| Protein Properties |
Length: 442aa MW: 49126.9 Da PI: 6.9397 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.1G119200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 262.5 | 1.5e-80 | 55 | 428 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl......f 84
l +lLl++Ae v++++ +a++l + + l+s+ g+++qR++ yf++AL+++ r ++ ++++ ++++ ++ +e+ +a ++ f
Prupe.1G119200.1.p 55 LAHLLLAFAEKVAKQQYGCARKLQNLCHFLSSSCGNSVQRVVYYFAKALQEKTDReTGRNTSEGSESRDVLAMHFQEA-MASSTpalmacF 144
579*****************9988888888************************955555555555555554443333.222223444447 PP
GRAS 85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgv 174
ev P+++++ ++ qaI+e+v++++++H iD+ i G++ + L+qaLa+R e p l++T+vg +s+e++e tg+rLa+fAe+l++
Prupe.1G119200.1.p 145 LEV-PFYQITEFAGIQAIVESVASAKKIHFIDLAIRTGGHCIVLMQALATRYECPIeLLKVTAVGV---TSREKMEDTGRRLAQFAEALKL 231
775.***********************************************97665499*******...68******************** PP
GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyys 265
pf+f+v ++k+++d++ ++++++ gE+ aV + l l ++++++ ++es ++k++++l+P+++v++e ea+hns++F +rf eal yys
Prupe.1G119200.1.p 232 PFSFKVAMVKDIKDVNEDTFELEDGETAAVYCPLLLCSTMRQPSCSES----LIKVLRNLNPHLMVITEIEANHNSPTFTNRFNEALLYYS 318
******9********************************988888888....*************************************** PP
GRAS 266 alfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveees 355
a f++l++ + r s r+ +E+ +l+ ei+n++a eg+er+ r+ + Wr + ++G+ +++ls + qa+l+ ++++ + +++ +
Prupe.1G119200.1.p 319 AYFECLDVCMDRGSAYRMELEETYLSLEIKNIIASEGKERIIRRMKIDAWRTLFAKSGMVEAELSLSSLYQADLVAKQFAcGSCCTLDANG 409
********************************************************************************9999******* PP
GRAS 356 gslvlgWkdrpLvsvSaWr 374
+ l+ gWk+ p++s+S+W+
Prupe.1G119200.1.p 410 KGLIVGWKGTPILSLSVWK 428
******************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 442 aa
Download sequence Send
to blast |
MSCVPGLSTV EVMRVARASF IHFSSRRYAD DCMPARVLGS APLGLSDQET KDVELAHLLL 60
AFAEKVAKQQ YGCARKLQNL CHFLSSSCGN SVQRVVYYFA KALQEKTDRE TGRNTSEGSE 120
SRDVLAMHFQ EAMASSTPAL MACFLEVPFY QITEFAGIQA IVESVASAKK IHFIDLAIRT 180
GGHCIVLMQA LATRYECPIE LLKVTAVGVT SREKMEDTGR RLAQFAEALK LPFSFKVAMV 240
KDIKDVNEDT FELEDGETAA VYCPLLLCST MRQPSCSESL IKVLRNLNPH LMVITEIEAN 300
HNSPTFTNRF NEALLYYSAY FECLDVCMDR GSAYRMELEE TYLSLEIKNI IASEGKERII 360
RRMKIDAWRT LFAKSGMVEA ELSLSSLYQA DLVAKQFACG SCCTLDANGK GLIVGWKGTP 420
ILSLSVWKFH AVNAKTAKYL M*
|
