PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G119100.1.p
Common NamePRUPE_ppa024047mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 596aa    MW: 66738.9 Da    PI: 4.934
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G119100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS285.61.4e-872225931374
                GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykal.ppsetseknsseelaalkl.fsevs 88 
                         lve Ll+ Ae v  ++ e+a +lL+r   l+s++g++++R++ yf eAL++++ r ++  + k l +  + + ++  ++ + ++l  +   
  Prupe.1G119100.1.p 222 LVEFLLASAEKVGYQQYERAGKLLNRCDLLSSSTGNSVERVVYYFSEALREKIDReTGRVTPKGLgNKPSFDVNEAMKRPNETSLaCQIKI 312
                         57889**************************************************444445566633333444445555555555456668 PP

                GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
                         P+ ++++++  qaI+e v+++++vH+iD++i +G+QW  L+qaLasR++ p   l+i ++g    +s++ +eetg+rL++fAe++++pf+f
  Prupe.1G119100.1.p 313 PFGQVAQFAGIQAIVENVAEAKKVHVIDLEIRNGVQWTGLMQALASRSDCPVeLLKISAIGT---SSRKLIEETGKRLESFAESMNLPFSF 400
                         ************************************************6655499*******...579999******************** PP

                GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269
                         +++++ ++ dl+ ++++++++E++aV + +++ ++++++  les     ++++k+++P v vv+e e +hns+ F++rf+eal ++ a fd
  Prupe.1G119100.1.p 401 KLVMVPDMLDLKEDMFELDSEETVAVYSEFAMRSMVAQPDRLES----AMRVIKNIRPCVTVVTEVEGNHNSPVFVTRFIEALFFFGAYFD 487
                         **9999******************************99999999....******************************************* PP

                GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv 359
                         ++e+ + r++ +r+ +E  ++g+ i+n+va+eg+er+ r+ +   Wr+ + + G++++ ls++   q++l+l++++ +   +v+ + ++l+
  Prupe.1G119100.1.p 488 CVETCMERNDPNRMILESLYFGNGIRNIVAAEGEERKIRNVKIDVWRAFFARYGMEEIDLSSSSLYQVELVLKNFScGSSCTVNMDGKCLL 578
                         ****************************************************************************9999*********** PP

                GRAS 360 lgWkdrpLvsvSaWr 374
                          gWk+ pL s+S W+
  Prupe.1G119100.1.p 579 VGWKGTPLQSLSLWK 593
                         **************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098543.101196572IPR005202Transcription factor GRAS
PfamPF035144.7E-85222593IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 596 aa     Download sequence    Send to blast
MFSFGEFNFC RVQDKLSSTD KGSHIIMEEV KKIGKQVHSY EADNWGDSGG FGSLGSDYGF  60
YGNNHYSSGL LFPKFQQQEE QQPLVSDYGL FDAMQFDALF PPFQACLEEI GKLEDIPTLV  120
PHVEPKKGKR DFSSLAGLDL LNNYGSGFKR LNGERIFESS NYTACTDQVA GRKLSTEEIM  180
RVAGARFIRT SSQASGVASM LSHPYEFSFS GLSVEETRDV ELVEFLLASA EKVGYQQYER  240
AGKLLNRCDL LSSSTGNSVE RVVYYFSEAL REKIDRETGR VTPKGLGNKP SFDVNEAMKR  300
PNETSLACQI KIPFGQVAQF AGIQAIVENV AEAKKVHVID LEIRNGVQWT GLMQALASRS  360
DCPVELLKIS AIGTSSRKLI EETGKRLESF AESMNLPFSF KLVMVPDMLD LKEDMFELDS  420
EETVAVYSEF AMRSMVAQPD RLESAMRVIK NIRPCVTVVT EVEGNHNSPV FVTRFIEALF  480
FFGAYFDCVE TCMERNDPNR MILESLYFGN GIRNIVAAEG EERKIRNVKI DVWRAFFARY  540
GMEEIDLSSS SLYQVELVLK NFSCGSSCTV NMDGKCLLVG WKGTPLQSLS LWKFL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A2e-3623059227378Protein SCARECROW
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G119100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007224772.20.0DELLA protein RGL1
TrEMBLM5XKD70.0M5XKD7_PRUPE; Uncharacterized protein
STRINGEMJ259710.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47933162
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.12e-60RGA-like 2