PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c6_22390V3.1.p | ||||||||
Common Name | PHYPADRAFT_82495 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | BES1 | ||||||||
Protein Properties | Length: 510aa MW: 55832.1 Da PI: 7.2132 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 156.4 | 2.1e-48 | 49 | 158 | 4 | 114 |
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 r+p+++ErEnnkrRERrRRaiaaki+aGLRa+Gny+lpk+aD neVlkALc+eAGw ve+DGt +rkgs+p+ + e++ + ++ + + s++ Pp3c6_22390V3.1.p 49 LRMPSARERENNKRRERRRRAIAAKIFAGLRAHGNYCLPKHADHNEVLKALCQEAGWQVEEDGTIFRKGSQPP-SREVTTAHNTPEGTPSYE 139 69***********************************************************************.666666667777777777 PP DUF822 96 sslkssalaspvesysasp 114 s ks + +s s++ ++ Pp3c6_22390V3.1.p 140 RSFKSDTSPSTSCSQAGQT 158 7777766666555544333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.1E-43 | 50 | 158 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0030018 | anatomy | gametophore |
Sequence ? help Back to Top |
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Protein Sequence Length: 510 aa Download sequence Send to blast |
MQVGDRSFEQ GESSEVRKCT VRGCIKSTSG PWIVRRPPGK GQSTAPAVLR MPSARERENN 60 KRRERRRRAI AAKIFAGLRA HGNYCLPKHA DHNEVLKALC QEAGWQVEED GTIFRKGSQP 120 PSREVTTAHN TPEGTPSYER SFKSDTSPST SCSQAGQTSD EPTCTARSGG AEVRHLGRIS 180 VDSQFEDKRQ RCDPLSNFKT VVAFPSAVQA RNPNPNSRDP KNRAGPKSVA GFLLPEQTVR 240 LHHVGNLNDP PVPGAEDIAE VCTALAVKNE WETTQGTAGV LYSGGQTVGQ TYIVSCASEK 300 DTSGHDRFSH DPLVADMMDC VDLGQQLECG RRKRFLEHQS KQLEYDQLNP YLNVHMNGDS 360 SVVSQVQRQT QDPDPGKHYT LFPEAADLLN QSQREQGDQY SCITHEMVDV TGQAYKSLKD 420 GLCLWSGRDG ASVSTGSTRL SLHPAAAAAS TTASNRGGAS IISLQHKKVD ADEDIVKDIA 480 DDLTLTLCTS YMALLFCMHL NSRWSIQHE* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 1e-17 | 50 | 125 | 372 | 447 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-17 | 50 | 125 | 372 | 447 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-17 | 50 | 125 | 372 | 447 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-17 | 50 | 125 | 372 | 447 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024377600.1 | 0.0 | uncharacterized protein LOC112283296 | ||||
TrEMBL | A0A2K1KGP4 | 0.0 | A0A2K1KGP4_PHYPA; Uncharacterized protein | ||||
STRING | PP1S103_145V6.1 | 0.0 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP10084 | 10 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36780.1 | 9e-19 | BES1/BZR1 homolog 2 |
Link Out ? help Back to Top | |
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Phytozome | Pp3c6_22390V3.1.p |
Entrez Gene | 5931734 |
Publications ? help Back to Top | |||
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