PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c6_11070V3.2.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family VOZ
Protein Properties Length: 485aa    MW: 53455.7 Da    PI: 6.3116
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c6_11070V3.2.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ348.72.5e-1072024194217
                VOZ   4 saflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 
                        +a+l pkcalwdc+rp++g ++ + ycssfh++la+ eg+pg+ pv+rp+gidlkdg+lfaal a+v g+ vgipe +gaat+kspwna++l
  Pp3c6_11070V3.2.p 202 AAYLHPKCALWDCPRPCRGGNEGTFYCSSFHEELAITEGAPGMCPVVRPGGIDLKDGPLFAALAARVGGHAVGIPELQGAATSKSPWNATDL 293
                        89****************************************************************************************** PP

                VOZ  96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlel 187
                        fd+++  get+rewlffdkprrafesg rkqrslpdy grgwhesrkq+mk++gglkrsyymdpqp +  ewh+yeye+  + ++alyrlel
  Pp3c6_11070V3.2.p 294 FDVAVHPGETLREWLFFDKPRRAFESGTRKQRSLPDYGGRGWHESRKQIMKDLGGLKRSYYMDPQPEGLNEWHMYEYEVIACTDCALYRLEL 385
                        ******************************************************************************************** PP

                VOZ 188 klvde.kksakgk...vskdsladlqkklgrlta 217
                        k+vd+ k+s k k    + +s+a lq+++grl+a
  Pp3c6_11070V3.2.p 386 KVVDAsKRSGKVKaqaQTDSSVASLQHQIGRLSA 419
                        ***963667777722224568***********97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MEVMVGEDSA MKQKPSRSSQ HFRAKANNRV DDLQCMVSDL QQARREGRLK DVSMLEEQMH  60
QMLREWKAEL REASPTSSLL QVASPCNSEL SSDMERLLQL HDEDDDATSK AAPMPEMDDQ  120
QPYNHDHPNN SSSHHHQETT VLEAFARIEQ SLQEDIQSTS QVAASSGGHD GIVQPSTMPQ  180
HNPVVHTMSD HFSMSAMVSP LAAYLHPKCA LWDCPRPCRG GNEGTFYCSS FHEELAITEG  240
APGMCPVVRP GGIDLKDGPL FAALAARVGG HAVGIPELQG AATSKSPWNA TDLFDVAVHP  300
GETLREWLFF DKPRRAFESG TRKQRSLPDY GGRGWHESRK QIMKDLGGLK RSYYMDPQPE  360
GLNEWHMYEY EVIACTDCAL YRLELKVVDA SKRSGKVKAQ AQTDSSVASL QHQIGRLSAD  420
LSQFESQNHV LGNVGDGRDS NRGRGRASQK RGLIKSPGPG PLVSALSGSS SREHTPFNYT  480
AELP*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.62660.0gametophore| protonema
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB1646470.0AB164647.1 Physcomitrella patens PpVOZ1 mRNA for one zinc finger protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024378749.10.0transcription factor VOZ1-like isoform X1
SwissprotQ9SGQ01e-140VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A2K1KF990.0A0A2K1KF99_PHYPA; Uncharacterized protein
STRINGPP1S113_68V6.10.0(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP23271335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-140vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]