PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c21_5770V3.3.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 423aa    MW: 42802.9 Da    PI: 5.5007
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c21_5770V3.3.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.88.8e-22288350163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+e+kr+rrkq+NRe+ArrsR+RK+ae+eeL  +v++L+ eN +L+ el+++++e+++l++e+
  Pp3c21_5770V3.3.p 288 EREVKRQRRKQSNRESARRSRLRKQAECEELGMRVDSLTVENVSLRTELSRMTEECKRLQAEN 350
                        799********************************************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.6E-1438109IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1701.4E-18282347No hitNo description
SMARTSM003386.9E-20288352IPR004827Basic-leucine zipper domain
PfamPF001701.1E-19288350IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.645290353IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.88E-11291347No hitNo description
CDDcd147021.33E-23293343No hitNo description
PROSITE patternPS000360295310IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MGAAGETATA PPAASKGPKT SSGPPTSGAT TSPTPIASHD PNAQAGAAGY NEWLAAFQAY  60
YQAGAQPPAG GFPHPYMWGG QPMMPPPYGG PHPSYGAMYP PGGMYGHPMY GQYGTPTPDG  120
MAGAEQGADG KAEAKGSDGG KAAPLKRSKG SKSSLQLLKV SDSGGKGNGV SQSVSNGEEG  180
EHDGETGSDE GGSTDASREE NAQNLLGGKR SFEQLAMEAV GAPAYMGTPG GAAGVPGGAV  240
GTPGPGGSLD MSLDYWTAGS VPQAKGAMRA SGSPSTSAPP AEMWLTDERE VKRQRRKQSN  300
RESARRSRLR KQAECEELGM RVDSLTVENV SLRTELSRMT EECKRLQAEN SSLMHKVRGI  360
SGAEMGGAAG SGDVASAGGD NEAVVSAKEI EESQSNGNGH ATKARDEKSG GVKGQEEAGA  420
AA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1304310RRSRLRK
2304311RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.59690.0gametophore| protonema
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024359043.10.0bZIP transcription factor 68-like
RefseqXP_024359274.10.0bZIP transcription factor 68-like
RefseqXP_024359275.10.0bZIP transcription factor 68-like
TrEMBLA0A2K1IQU70.0A0A2K1IQU7_PHYPA; Uncharacterized protein
STRINGPP1S27_273V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.17e-27basic region/leucine zipper transcription factor 16