PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c18_19240V3.4.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 431aa    MW: 44565.1 Da    PI: 5.3502
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c18_19240V3.4.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_173.52.9e-23287349163
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         e+e+kr+rrkq+NRe+ArrsR+RK+ae+eeL ++v++L+aeN++L  el+++++e+++l++e+
  Pp3c18_19240V3.4.p 287 EREVKRQRRKQSNRESARRSRLRKQAECEELGNRVETLTAENMTLLTELNRMTEECKRLQAEN 349
                         799********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077779.4E-1328109IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1705.8E-19281346No hitNo description
PfamPF001701.7E-20287349IPR004827Basic-leucine zipper domain
SMARTSM003383.6E-21287351IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.564289352IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.94E-11290345No hitNo description
CDDcd147025.36E-26292342No hitNo description
PROSITE patternPS000360294309IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MGTAEETVVI PPATSKAPKT SSATANTTAT KSLIPLASHD PDAQAGAHGY NEWLAAFQAY  60
YQAGAQPPVG GFPHPYMWGG QPVMPPGYRG PHPSYGAMYP PGGMYGHPMY GQYGTPAPEA  120
ATGVEQGADG KTEAKSGEGA KLSTLKKSKN GKGGLQPSKN AEAGGKGNGV PQNVINGERE  180
HDDETGTDDG GSTDASREEN AQNLLGGKRS FEQMAMEAVG APPYMPPPGA VSGAPAPTVG  240
TPGPGGSLDM SLDYWTAGSL SQAKGGKQTS GSPSTSAPPA ELWLTDEREV KRQRRKQSNR  300
ESARRSRLRK QAECEELGNR VETLTAENMT LLTELNRMTE ECKRLQAENG SLVQKIRGTP  360
VSEMGGAHAA AADAGDVAPV GGENEAVLSA KEIEESQNDG NGNITKPKEG KPAVNGGSGT  420
KVQEEQAAAT *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1303309RRSRLRK
2303310RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.9540.0protonema| sporophyte
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024403163.10.0bZIP transcription factor 68-like isoform X1
RefseqXP_024403164.10.0bZIP transcription factor 68-like isoform X1
RefseqXP_024403165.10.0bZIP transcription factor 68-like isoform X1
RefseqXP_024403166.10.0bZIP transcription factor 68-like isoform X1
RefseqXP_024403167.10.0bZIP transcription factor 68-like isoform X1
RefseqXP_024403168.10.0bZIP transcription factor 68-like isoform X1
RefseqXP_024403169.10.0bZIP transcription factor 68-like isoform X1
RefseqXP_024403170.10.0bZIP transcription factor 68-like isoform X1
TrEMBLA0A2K1J1L80.0A0A2K1J1L8_PHYPA; Uncharacterized protein
STRINGPP1S33_301V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.17e-26basic region/leucine zipper transcription factor 68