PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c13_15030V3.8.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 944aa    MW: 101744 Da    PI: 5.8159
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c13_15030V3.8.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.65.6e-13357416261
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                          + kr  r+++NRe+A+ sRqRKk++++eLe k  +++a   +L  ++++l+ e  +l+ 
  Pp3c13_15030V3.8.p 357 DDEKRRARLMRNRESAQLSRQRKKMYVDELEGKLRTMTATVAELNATISHLTAENVNLRR 416
                         56799***********************************************99888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-15356420IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.461358421IPR004827Basic-leucine zipper domain
PfamPF001701.2E-10359417IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-15360418No hitNo description
SuperFamilySSF579591.13E-11360418No hitNo description
CDDcd147045.55E-21361411No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006990Biological Processpositive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response
GO:0009408Biological Processresponse to heat
GO:0005635Cellular Componentnuclear envelope
GO:0005654Cellular Componentnucleoplasm
GO:0005783Cellular Componentendoplasmic reticulum
GO:0016020Cellular Componentmembrane
GO:0048471Cellular Componentperinuclear region of cytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 944 aa     Download sequence    Send to blast
MSFQNMERKI EIPDIRGDDG ETLEKEDPEI ATLSSSEASV NWENISEDWV SLFLDPATFD  60
EHATPLPSDL ESYSRFDSTL RESNDRFSPQ ELLADSLLLH SIDDQLSSDL VLQSSVNVVE  120
DIFGKDGSST KGLKRADLKH SEGEPRGQNS ATVSNFSPAP QSNATQTACA STSMEVYASS  180
SPASSLTQVS GDSSPGMEVD LWKNKEANSD LLITLEQRVN GEVSSRSESP TSPSSAMGVE  240
NGCPNVKKLQ SEGGRTGSRD VSSTGSAVRT GIPSTALQSD AFDVRQLRSI DNSFKVGFLG  300
RSGDTEDSVE DREESNKLFC REYFQSESFK LQNLEVPEDQ QSDRSDGERK ADAGVEDDEK  360
RRARLMRNRE SAQLSRQRKK MYVDELEGKL RTMTATVAEL NATISHLTAE NVNLRRQLGY  420
YYPAPGVCPP RPGMPMQVLP MGPYPGMVAG RPIYSGGQMP PVPIPRIKAK IPARSTKRAK  480
SEDTKEGGDR KRTKLKAAGA ASMAVMGLLC VAMLFSSFDQ GLNGSGGVED YTRIGNVRIG  540
GRVLTSWDEA VNPLNNTGLS SSDTEPGWVP LQEGEYGPER EGVANIHMRL AAEKVQDEAV  600
KSQISKAGLE SSARQSVDGN EDLGISKEKG SQLPPDYFSS GKVPLQMRRE IVSTNTSQSY  660
AATVFVPGAN GLVKVDGNLI IQAVMAGDKA AKKQSKNKQI VGGKKKGPVS KNLPVKVLDN  720
LAPRETKVVQ NATTGPFVIA RPLPERAKSV FGTNNPVSPV LHAGALQQWM LGGLHGPVLN  780
TGMCTELFQF DTAAATTSPE QGSTPEPKNM AESVAARAAQ GSPHNITSTL SVPDAPRSRR  840
DPFAVPLPPV KPKSAAEGDG VRNDTDPRVK NIGRDHMHGR NLRDEVSSMV VSVMAGPEEY  900
GDSRKQTKGL SRIFVVILVQ NQKYVTYSCM LPSGGPQGHV VAA*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00345DAPTransfer from AT3G10800Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024392785.10.0bZIP transcription factor 39-like isoform X7
TrEMBLA0A2K1JM110.0A0A2K1JM11_PHYPA; Uncharacterized protein
STRINGPP1S158_117V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10800.11e-37bZIP family protein