PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c12_5150V3.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 705aa MW: 78531.4 Da PI: 8.3085 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 246.6 | 1.6e-75 | 389 | 704 | 21 | 301 |
GAGA_bind 21 kenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla.....salpvgvqvlsgtks 107 k+ ++++m +iaerda++ e+ +al+ek aa+aerd a lqrd a a+r++a++ rd +l+al e++++ ++ + ++++g+k Pp3c12_5150V3.1.p 389 KSASSIEIMDIIAERDAALMEKSTALAEKMAAYAERDAAILQRDIASADRDAAILTRDAALAALARLERKSSgrgrrPSQTALDESMHGSKL 480 6677899*********************************************************9999888777665444455677889999 PP GAGA_bind 108 idslqqlse..........................pqledsavelreeeklealpieeaaeeakekkkkkkrqrak.kpkekkak..kkkkk 170 ++ ++ ++ +l+ r++e + + ++++++ ++ ++ ++++++++ pk++++ ++ + Pp3c12_5150V3.1.p 481 LQRMDLAEHsafssefhptaanpshsgimlldpdsAHLQGVHRFSRDKESQIEIFVRTKRKATEMAEATHRGKHPRaAPKKSRNWpvTHQGQ 572 99999988867777777777777776663333222222222111222222222222332222222222222222210222222222222223 PP GAGA_bind 171 sekskkkvkkesaderskaekksidlvlngvslD.estlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmS 261 +++++++++++ a+e+ + ++ +lv + + P+P CsCtG+ +qCY+WGnGGWqSaCCtt iS++PLP ++k+rg+R+agrKmS Pp3c12_5150V3.1.p 573 QPVQERESQAQVANEEEGGQIREPELVSSRIFRSqTVPTPIPYCSCTGMNQQCYRWGNGGWQSACCTTLISMFPLPLNPKKRGSRLAGRKMS 664 3334444444444455667777778877666433033456778************************************************* PP GAGA_bind 262 qgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 gaf klLekL +eG +++ pvDL++hWAkHGtn++vt+r Pp3c12_5150V3.1.p 665 AGAFDKLLEKLVSEGVNINLPVDLREHWAKHGTNRYVTLR 704 **************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.200.20 | 7.2E-14 | 27 | 94 | No hit | No description |
SuperFamily | SSF56112 | 2.43E-70 | 30 | 291 | IPR011009 | Protein kinase-like domain |
PROSITE profile | PS50011 | 41.135 | 32 | 290 | IPR000719 | Protein kinase domain |
Pfam | PF00069 | 1.1E-50 | 32 | 290 | IPR000719 | Protein kinase domain |
SMART | SM00220 | 6.4E-67 | 32 | 290 | IPR000719 | Protein kinase domain |
Gene3D | G3DSA:1.10.510.10 | 4.8E-54 | 95 | 297 | No hit | No description |
SMART | SM01226 | 2.5E-59 | 377 | 704 | IPR010409 | GAGA-binding transcriptional activator |
Pfam | PF06217 | 1.5E-69 | 381 | 704 | IPR010409 | GAGA-binding transcriptional activator |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 705 aa Download sequence Send to blast |
MEGQGKEQKN GVGEEGGDEE GRRGYPLSAS DYRIMEELGR GASCTVYSAL CLPYNELVAI 60 KVLQLDEGTR ISSDFWTASK SRIQHPNVLT AYCSFTTSHN VWVVMPFMAG GSCLDIMKAA 120 FSNGFDESVV CTFLKESLMG LNYLHHHGRI HQDVKAGNIF VDGNGRVKLA DFGISTCILN 180 AGDQQQSRSS LLRSCYWMAP EMIEQVHLYD SKADIWSFGI TALELVHGIV PFSKYPMKVF 240 FNTLQNKISE MNCACFKMFS KSFKDMIAIC LAKDPSRRPT TEQLLRHPFF KQARSPEYIY 300 QHVLDGLSSL GERSKNLKII EAAQLALKKS PHSKEKLSQG EYLRGLHNWI CNAHDIRKTE 360 TEVAIFKGGP ADLAAQMDVD WESSCLHSKS ASSIEIMDII AERDAALMEK STALAEKMAA 420 YAERDAAILQ RDIASADRDA AILTRDAALA ALARLERKSS GRGRRPSQTA LDESMHGSKL 480 LQRMDLAEHS AFSSEFHPTA ANPSHSGIML LDPDSAHLQG VHRFSRDKES QIEIFVRTKR 540 KATEMAEATH RGKHPRAAPK KSRNWPVTHQ GQQPVQERES QAQVANEEEG GQIREPELVS 600 SRIFRSQTVP TPIPYCSCTG MNQQCYRWGN GGWQSACCTT LISMFPLPLN PKKRGSRLAG 660 RKMSAGAFDK LLEKLVSEGV NINLPVDLRE HWAKHGTNRY VTLR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5d9h_A | 1e-75 | 24 | 330 | 12 | 334 | STE20/SPS1-related proline-alanine-rich protein kinase |
5d9h_B | 1e-75 | 24 | 330 | 12 | 334 | STE20/SPS1-related proline-alanine-rich protein kinase |
5dbx_A | 8e-76 | 24 | 330 | 5 | 327 | STE20/SPS1-related proline-alanine-rich protein kinase |
5dbx_B | 8e-76 | 24 | 330 | 5 | 327 | STE20/SPS1-related proline-alanine-rich protein kinase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppa.19310 | 0.0 | gametophore |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FJ982280 | 0.0 | FJ982280.1 Physcomitrella patens GAGA-binding transcriptional activator (BBR/BPC1) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024391178.1 | 0.0 | serine/threonine-protein kinase 24-like | ||||
TrEMBL | A0A2K1JPJ5 | 0.0 | A0A2K1JPJ5_PHYPA; Uncharacterized protein | ||||
STRING | PP1S56_2V6.1 | 0.0 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68120.1 | 2e-44 | basic pentacysteine 3 |
Link Out ? help Back to Top | |
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Phytozome | Pp3c12_5150V3.1.p |