PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016652381.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 484aa    MW: 54570.5 Da    PI: 4.4115
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016652381.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.85.4e-087090122
             AP2  1 sgykGVrwdkkrgrWvAeIrdp 22
                    + y+GVr++  +g+WvAeIr+p
  XP_016652381.1 70 CVYRGVRQRT-WGKWVAEIREP 90
                    68*****999.*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510329.99371147IPR001471AP2/ERF domain
SuperFamilySSF541713.47E-671105IPR016177DNA-binding domain
SMARTSM003808.1E-771110IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-87191IPR001471AP2/ERF domain
CDDcd000181.24E-1072104No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MTSEASDGDK KLRKRRNGCN SIEDTLAKWK NYNDRFDLAK DGVKKTQRTP SKGSKKGCMK  60
GKGGPENSDC VYRGVRQRTW GKWVAEIREP ARAMYGGLAR LNFPQNTMKL KKYSNSVSSG  120
TTKTTSSSYE SLTTYNNGDE AEGLDMSSKC AMESSRSVVG ESKERSDFFE DCVHKEPKQE  180
NDCSVGFATQ DFEVSDATLR EAKDVKCESE TEYELARNDA EQTSVFQTGS YESFNRRPDY  240
LHNELQVVNL DSVPDGKPYY NDWESLETLL RSNNDYLNNE LVDVECNGRN DCNPLEDVNV  300
EKPVTNEALE KEFPMILESG SHNDPDDSCH YMHNEQINVA SNLVTADFEP SNDVKGSMTD  360
QELQGGLVET TNLNGHNGFI DSYACSDDIR PSNDIEMQEN RLANLHNWSV EESYGIDAQN  420
QQWGRLPNLP NQLQTQPQVN IPGSLAHMEE ASLGIDFDVD LFRQNYDSGG LEEQLFHGSW  480
FPYS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1815DKKLRKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016652381.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016652381.10.0PREDICTED: uncharacterized protein LOC103342931
TrEMBLA0A314Z5670.0A0A314Z567_PRUYE; Uncharacterized protein
STRINGEMJ097900.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2220944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11020.16e-20DRE/CRT-binding protein 2B