PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016648521.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 225aa    MW: 25842.8 Da    PI: 5.7475
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016648521.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.71.1e-2361371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sgyWka 85 
                     +p+G+rF P++eel+ +yL ++v+g++ +   v++++d+y + ePw++ +    +  +  +++++y F++ +kk+++g+r  r++    +g+Wk 
  XP_016648521.1   6 VPVGYRFTPSEEELLLHYLLPRVNGNDYPK-GVVPDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGVWKG 97 
                     599************************999.99*******9879****7423322..24355688******************643344999*** PP

             NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + k++ +  g+++g++k + + +  +p+    +W+m e++l
  XP_016648521.1  98 EDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137
                     ********9.999***********655555..89*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-283141IPR003441NAC domain
PROSITE profilePS5100526.336153IPR003441NAC domain
PfamPF023652.4E-157137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MGGYQVPVGY RFTPSEEELL LHYLLPRVNG NDYPKGVVPD CDLYGTKEPW EIWRDFHHSS  60
PDDQEDIYVF TTLKKKTPNG SRFCRTVGAA GTGVWKGEDS GKKIRACGND IGIRKRFRYM  120
NPGSPHDDRW IMLEFQLDES LKETSGKSKL EERQTHEVDM PSRGEIQAQH VHDDQQQHID  180
ASTYDQLRVL EDFHMNDVEG EQDTMVNPTL LAHFACTVRS AGHKY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-15615217156NO APICAL MERISTEM PROTEIN
1ut4_B2e-15615217156NO APICAL MERISTEM PROTEIN
1ut7_A2e-15615217156NO APICAL MERISTEM PROTEIN
1ut7_B2e-15615217156NO APICAL MERISTEM PROTEIN
4dul_A2e-15615217156NAC domain-containing protein 19
4dul_B2e-15615217156NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016648521.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934140.0KT893414.1 Prunus persica cultivar Xiaobaitao NAC66 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016648521.11e-171PREDICTED: NAC domain-containing protein 66-like
TrEMBLM5WX711e-141M5WX71_PRUPE; NAC66
STRINGXP_008226306.11e-147(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.14e-21NAC domain protein 66