PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016646832.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 739aa    MW: 80957.5 Da    PI: 6.3203
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016646832.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.83.5e-31255312259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES-.-SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYege.Hnhe 59 
                     +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers  d++++ei+Y+g  Hnh 
  XP_016646832.1 255 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSF-DGQITEIIYKGApHNHA 312
                     7****************************************.**********9669996 PP
2WRKY103.21.4e-32473531159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++++ k+v++tYeg+Hnhe
  XP_016646832.1 473 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKFVITTYEGKHNHE 531
                     59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.743249314IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-26249314IPR003657WRKY domain
SuperFamilySSF1182901.2E-23252314IPR003657WRKY domain
SMARTSM007741.1E-33254313IPR003657WRKY domain
PfamPF031068.1E-23255311IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.8E-36458533IPR003657WRKY domain
SuperFamilySSF1182906.15E-28466533IPR003657WRKY domain
PROSITE profilePS5081137.516468533IPR003657WRKY domain
SMARTSM007744.7E-37473532IPR003657WRKY domain
PfamPF031064.9E-25474531IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 739 aa     Download sequence    Send to blast
MGFLRTMDQE DDAVSENKTK GCGPGANTIS IAERRAAKCG FNAERINTAR FRTTSPLPSP  60
AAAARSPCLT IPPGISPTAL LDSPMMLPNS QALPSPTTGT FPLLPPNDDS SVLKSGTHED  120
GHRGSDLGSS FTFKRQGDPK YLPGYSSFEN QGSTVDYQSL VLEQQPIDFE FPMEFPEEAN  180
AKNYAVDPST HVKNLNSGIL NANCVDLQRS NSSAASEQNS LPKEPIHGED VGSHPFLEGE  240
HRGSYPSAGM VRTSEDGYNW RKYGQKQVKG SEYPRSYYKC THPNCQVKKK VERSFDGQIT  300
EIIYKGAPHN HAMPQPNRRA GASLGSSFSF DETSEMSEGS RASVKVEGGL VWTNIQSGKD  360
IKTGYDGRAE GLERTSSTSV VTDLSDPLST TQGKSMSIFE SAETPEFSST LASHDDDDRG  420
TQGSISLGDD ADDEESESKR RKKESCLMEP SLASRAVREP RVVVQIESEV DILDDGYRWR  480
KYGQKVVKGN PNPRSYYKCT SAGCSVRKHV ERASHNLKFV ITTYEGKHNH EVPAARNSNH  540
INSNGGNAHP STANAQPALA LPRSSNNPKP ETQVQDLAPH FDRKPEFHEE YLRSSFLGNF  600
NNELKFGVPS IYQMKYPPLQ NTMPYSSFGL HANHGVTHQA GSVVPDFPIS LPLNLPPSGN  660
LPLSGFDFNN GKSVCPVQPY FSGQQLQEDD MRFLKPKQEQ KDDNLYDACL PIIDQANASL  720
SSSSSSSLLY QRIMGGYPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-33243534178Probable WRKY transcription factor 4
2lex_A1e-33243534178Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016646832.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016646832.10.0PREDICTED: probable WRKY transcription factor 2
TrEMBLM5WG220.0M5WG22_PRUPE; Uncharacterized protein (Fragment)
STRINGXP_008218446.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83493445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-101WRKY DNA-binding protein 2