PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008245301.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 337aa    MW: 38161.2 Da    PI: 5.5913
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008245301.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.72.1e-22151211259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDg+ WrKYGqK + +s+++r+YYrCt++   +C+++k v++ ++ p ++ +tY+g+H+++
  XP_008245301.1 151 DDGHGWRKYGQKRILNSKHSRNYYRCTHKfeqSCKATKYVQQIQDHPPMFRTTYHGNHTCR 211
                     8***************************9999**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.6E-23136211IPR003657WRKY domain
SuperFamilySSF1182903.66E-22143211IPR003657WRKY domain
PROSITE profilePS5081118.315145208IPR003657WRKY domain
SMARTSM007741.8E-33150212IPR003657WRKY domain
PfamPF031061.3E-22151211IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MEWSWPESVL SNGERVKEEL MQGRELAGKL CRVFDNHKST LVSGFGGGGG GSAEDLVDKI  60
LGSFANTLLI LNGKESDGEI VSGDQIQGIS SGGGSADSSS WDANHTAAVI KSEDFYEESC  120
KTTSTFKDRR GSYKRRKTSH CWTRDTPALA DDGHGWRKYG QKRILNSKHS RNYYRCTHKF  180
EQSCKATKYV QQIQDHPPMF RTTYHGNHTC RDYLKASELL LDCTSPRESS NFIRFGDTKQ  240
DHPFFSFFTS VRKEELVFKE ESIIKEEIPP TSDDRVMTSH DNYSWLCDYF VSPDLTTFES  300
SGPPSGFSST LDEFDHEDVI SRLMMGSFDL DEVLQYI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-20151211969OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008245301.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008245301.10.0PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A314XYG70.0A0A314XYG7_PRUYE; Putative WRKY transcription factor 70
STRINGXP_008245301.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-28WRKY DNA-binding protein 70