PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_008243598.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | EIL | ||||||||
Protein Properties | Length: 601aa MW: 67310.1 Da PI: 5.2633 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 444.4 | 9.5e-136 | 37 | 387 | 1 | 324 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 eel+krmwkd+++lkrlke++kq+le+++a ++++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWW XP_008243598.1 37 EELEKRMWKDRIKLKRLKEKEKQKLEAQQA-AEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWW 130 8************************99998.99************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 kekv+fd+ngpaai+ky+ +++++s+++++ ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekg +pPWWPtG+e+ww++lgl+ q XP_008243598.1 131 KEKVKFDKNGPAAIAKYEEECIAMSDADNS--RNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGNPPPWWPTGNEDWWPKLGLPYGQ 223 ******************999999988888..78999999******************************************************* PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX........XXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss........slrkqspkvtls 277 + ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++ +++++ ++ +s XP_008243598.1 224 S-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGtsgitetpQSSRGGKQAAVS 317 9.9**********************************************************************444568777766669999999* PP XXXXXXXXXXXXXX.XXXXXXXXXX.......................XXXXXXXXXXXXXXXXXXXXX. CS EIN3 278 ceqkedvegkkeskikhvqavktta.......................gfpvvrkrkkkpsesakvsske 324 +++++dv+g+++ + ++++++++ + + + +rk+++++ + v++ XP_008243598.1 318 SNSDYDVDGTDDGVGSVSSKDDRRNqpmdlepssnlcnntlnhvqdkeQSEKQPRRKRPRVRASPVEQLP 387 ********888888888888888878999********888877777777777777777776666665543 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.5E-127 | 37 | 286 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.5E-71 | 161 | 294 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 7.06E-62 | 167 | 289 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042762 | Biological Process | regulation of sulfur metabolic process | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 601 aa Download sequence Send to blast |
MGDVEEIGPD ISSDIEEDLR CENIADKDVS DEEIEAEELE KRMWKDRIKL KRLKEKEKQK 60 LEAQQAAEKQ KPKQTSDQAR RKKMSRAQDG ILKYMLKLME VCKARGFVYG IIPEKGKPVS 120 GASDNIRAWW KEKVKFDKNG PAAIAKYEEE CIAMSDADNS RNGNSQSILQ DLQDATLGSL 180 LSSLMQHCDP PQRKYPLEKG NPPPWWPTGN EDWWPKLGLP YGQSPPYKKP HDLKKMWKVG 240 VLTAVIKHMS PDIAKIRRHV RQSKCLQDKM TAKESAIWLG VLSREESLIR QPSSDNGTSG 300 ITETPQSSRG GKQAAVSSNS DYDVDGTDDG VGSVSSKDDR RNQPMDLEPS SNLCNNTLNH 360 VQDKEQSEKQ PRRKRPRVRA SPVEQLPAPS HNENIHLGPR NALPDINHTD VQMTGFQVHD 420 NQQENGTITT LRPLEKDLDI QAQLPASEFN YYSAVPSDNV ISTQGMHVGG TPMLYHGVQD 480 AEVHCGDTFN VYNPSAEYPP SHDQPPSQIV MNEPQIRPAD GVHIPTVHRN GSEIAGGDLP 540 YYVKDTFQSE QDRTVNANFG SPIDSLSLDY GLFNSPFHFG IDGSGSLDDL ELEEMMEYFA 600 A |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 7e-76 | 166 | 297 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00233 | DAP | Transfer from AT1G73730 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_008243598.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF031065 | 0.0 | EF031065.1 Prunus persica EIL1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008243598.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_016652123.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_016652124.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 0.0 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | M5WRR1 | 0.0 | M5WRR1_PRUPE; Uncharacterized protein | ||||
STRING | XP_008243598.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-171 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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