PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008241498.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 267aa    MW: 29327.3 Da    PI: 5.9677
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008241498.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.4e-21122171255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    r +r++lg+f taeeAa+a+++a+ +++g
  XP_008241498.1 122 KYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFETAEEAARAYDKAAIEFRG 171
                     8********.**********82....48***********************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.05E-22122180IPR016177DNA-binding domain
PfamPF008471.0E-14122171IPR001471AP2/ERF domain
CDDcd000183.94E-33122178No hitNo description
PROSITE profilePS5103225.159122179IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-32122179IPR001471AP2/ERF domain
SMARTSM003801.8E-38122185IPR001471AP2/ERF domain
PRINTSPR003672.3E-12123134IPR001471AP2/ERF domain
PRINTSPR003672.3E-12145161IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MPSHANRMQQ EQEHCIMVSA LKHVISGGIN AGGSGPTSQQ QQLLGAVHSA TSSVPSTRDG  60
TQSATDQLHM LSFSAEGDTC RVCGIEGCLG CNYFPSTTLP DRNKQLNLGS GANAGTRKGK  120
NKYRGVRQRP WGKWAAEIRD PRRAARVWLG TFETAEEAAR AYDKAAIEFR GDKAKLNFSL  180
TSSDQHNNIT NSNITSSSRT RTSPQLIRSM EEADADQDKV NPITVKQSEK LEIYESSAPQ  240
EENDQFLWDM SQDGDDDDDL KAWMSAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-23123180361ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008241498.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008241498.10.0PREDICTED: ethylene-responsive transcription factor ERF109-like
TrEMBLM5VWA31e-171M5VWA3_PRUPE; Uncharacterized protein
STRINGXP_008241498.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF29623072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-30redox responsive transcription factor 1