PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_008236523.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 363aa MW: 40972.6 Da PI: 8.2505 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 76.3 | 3.5e-24 | 88 | 144 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK kg+e + sYY Ct++ C+ kkkv rs d++++++ Y+g+Hnhe XP_008236523.1 88 EDGYSWRKYGQKGEKGNEGSTSYYMCTYPYCKRKKKVGRSL-DGQITQVAYKGTHNHE 144 7****************************************.***************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 17.144 | 82 | 146 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.4E-20 | 82 | 144 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.36E-18 | 85 | 144 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.8E-20 | 87 | 145 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.6E-18 | 88 | 144 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence Send to blast |
MESHEHLNNN FGAVNSSGTI MENWKRLCAM LQNSNEPPVV VGDLQRIMQE ESIESKQGAP 60 RLKKNFCQVY SSTKMTGAAE SKLVPISEDG YSWRKYGQKG EKGNEGSTSY YMCTYPYCKR 120 KKKVGRSLDG QITQVAYKGT HNHEERKDMN QSLSRSVWEL RGGAPLLSIT PDVLPSIGSS 180 VDNVDHEEPI LHEQKHDHDQ PSHENTNYGK PRQATKTTSG TEWFFLLTSL GLEILSAAFD 240 QASSPSKPHY ALFGMLLAFG ALLTCICELL HKGIKEGVVL RRWGMLWWFY YPPPRYTVFG 300 TLPDIYGLAG GISQCVCSTI QYIYFCRRVN NPIKISLWPT IFLICLAASR LNGNRNETLV 360 HYD |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_008236523.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008236523.1 | 0.0 | PREDICTED: probable WRKY transcription factor 30 isoform X1 | ||||
STRING | XP_008236523.1 | 0.0 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 5e-20 | WRKY DNA-binding protein 33 |