PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008234170.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 323aa    MW: 36398.4 Da    PI: 5.9698
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008234170.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.31.6e-23131191259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg +WrKYGqKe+ ++++pr+Y+rCt +   gC+++k+v++ +++p++ ++tY g+H+++
  XP_008234170.1 131 EDGRAWRKYGQKEILNAPYPRAYFRCTRKydqGCRATKQVQQVQDNPRLYQTTYIGQHTCK 191
                     79*************************998899**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.1E-24119192IPR003657WRKY domain
PROSITE profilePS5081120.713125193IPR003657WRKY domain
SuperFamilySSF1182905.1E-23128191IPR003657WRKY domain
SMARTSM007743.1E-35130192IPR003657WRKY domain
PfamPF031065.4E-23131191IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MGSNHKRLIK ELVEGKKTAA ELQMLLHKPF GDHGSASAEE LVVKIMTSFT ESLSVLAAEK  60
KNPGDGHEDH QSGAFGEVYQ IKPEPSHSHC DDRSSGDSGE SRKVQGSKDR RGCYKRRKTS  120
QSWTTISSAI EDGRAWRKYG QKEILNAPYP RAYFRCTRKY DQGCRATKQV QQVQDNPRLY  180
QTTYIGQHTC KSMVPPQMII GSSDHWESQT VSSESETPNK QNHDFLGSSA IPIVKQEEYK  240
EGTPTPSDLT DNLSSLETNH LWSDFKDDFA LCDPAAMCVS TKMGSDNEDV VSNMYLDMDF  300
VVKSIDFDRD FNFDEVEFPK NSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-23124191269OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008234170.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008234170.10.0PREDICTED: probable WRKY transcription factor 70 isoform X1
TrEMBLM5XHJ00.0M5XHJ0_PRUPE; Uncharacterized protein
STRINGXP_008234170.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.19e-40WRKY DNA-binding protein 70