PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008227178.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 381aa    MW: 42548.8 Da    PI: 4.4749
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008227178.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.53.7e-25101421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                     lp+Gf+F+P+d++l+ +yL +kv+g+++  ++vi+e+d+y k+ePwd+ +    +  a+ +++yfF+k ++ + +++r+ r++ sg+Wk   + +
  XP_008227178.1  10 LPVGFKFRPRDDQLLGYYLLNKVRGTTFMYDNVIPEMDLYgKIEPWDIWHeyggHNLAKGEDLYFFTKLKSLSDKDSRAARTIGSGTWKGENSGT 104
                     79**************************99999*****99568*****742444222366799**************************999999 PP

             NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +v +   k+++ g+ k + +   + ++ +   W+mhey+l
  XP_008227178.1 105 TVSDPenKENDLGIWKRFHYE--NPKSVQDGCWIMHEYSL 142
                     999886566779999999886..566667999******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-307164IPR003441NAC domain
PROSITE profilePS5100529.55310165IPR003441NAC domain
PfamPF023656.9E-1711142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MAPCESAVNL PVGFKFRPRD DQLLGYYLLN KVRGTTFMYD NVIPEMDLYG KIEPWDIWHE  60
YGGHNLAKGE DLYFFTKLKS LSDKDSRAAR TIGSGTWKGE NSGTTVSDPE NKENDLGIWK  120
RFHYENPKSV QDGCWIMHEY SLHPSLVKPK PNSTNQFVLC RIRKNDRGKR KLRTAEEDNE  180
TDTPVQSQNK RQRPQQVTSF EELIGDCTPM SEATGVAGSV SYLPTGLTQS QPDSSFAYPI  240
TVVSSQARAN YTDDVSQFHG GGDGDALMSD FSHSDTAQPF TEQALGSYAV CNQERASDVH  300
ETRQGLVLTD NNIGYWPSPF GSEEDQVNAF DFSIDYDLLN HLIDCDDDND GPQKSSTAQF  360
MGMGMENTTT ASSEANMAII D
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-1341429140Stress-induced transcription factor NAC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166172RGKRKLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008227178.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934130.0KT893413.1 Prunus persica cultivar Jinliuzaohong NAC68 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008227178.10.0PREDICTED: NAC domain-containing protein 74-like
TrEMBLA0A1R3L5060.0A0A1R3L506_PRUPE; Uncharacterized protein
TrEMBLM5WM900.0M5WM90_PRUPE; Uncharacterized protein
STRINGXP_008227178.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.15e-18NAC-domain protein 101