PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008221513.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 261aa    MW: 29987.9 Da    PI: 5.2036
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008221513.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.47.1e-33712013128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdkevl 93 
                     +G+rF+P+++++vv+yL +k+ g++l+++++ike+ +y+++P +Lp+   k+  + +e ++F+ +++ y++ gk ++r+tksgyW   g+++ev+
  XP_008221513.1  71 VGYRFDPSEDQIVVFYLFNKILGRELPINDIIKEISVYDHDPDELPNgdfKHGLDCNEAFYFAYTEQVYSSrGKITRRTTKSGYWDLDGEEEEVK 165
                     7*********************************************5444444467799********99963777888****************9 PP

             NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + ++ +vg  k++vf+kg+ap+g +td +mheyr+
  XP_008221513.1 166 YRnGDITVGFEKVMVFHKGTAPNGIETDFIMHEYRV 201
                     9856677***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.09E-3369230IPR003441NAC domain
PROSITE profilePS5100535.33269230IPR003441NAC domain
PfamPF023653.4E-1671201IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MPYSSSFIEQ SFSHNSPTQT QTKAQVIIVL LFMALPSPQS TSQVPETEKD FDLLKCSKIE  60
NGKKEAEIHL VGYRFDPSED QIVVFYLFNK ILGRELPIND IIKEISVYDH DPDELPNGDF  120
KHGLDCNEAF YFAYTEQVYS SRGKITRRTT KSGYWDLDGE EEEVKYRNGD ITVGFEKVMV  180
FHKGTAPNGI ETDFIMHEYR VNPLIVPTHV LNDSIRAKIE RYVVCRIIHE GVSNFPRTNF  240
HQDGLLGLLK KQNQIDMTEI A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-236523010168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008221513.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221511.10.0PREDICTED: NAC transcription factor 29-like isoform X1
RefseqXP_008221512.10.0PREDICTED: NAC transcription factor 29-like isoform X1
RefseqXP_008221513.10.0PREDICTED: NAC transcription factor 29-like isoform X1
RefseqXP_016647392.10.0PREDICTED: NAC transcription factor 29-like isoform X1
TrEMBLA0A251R4K30.0A0A251R4K3_PRUPE; Uncharacterized protein
STRINGXP_008221511.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.14e-28NAC-like, activated by AP3/PI