PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008219985.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 353aa    MW: 38188 Da    PI: 5.021
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008219985.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.49.7e-16185236354
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                     ++kr rr+ +NRe+ArrsR+RK+a+++ Le  v++L +eN++L  +l   ++
  XP_008219985.1 185 DIKRIRRMVSNRESARRSRRRKQAQLADLEFQVEQLRGENSTLYRQLTDASQ 236
                     58*****************************************955544444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575124No hitNo description
SMARTSM003382.8E-14183247IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.093185248IPR004827Basic-leucine zipper domain
PfamPF001703.6E-13186232IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.93E-11187237No hitNo description
Gene3DG3DSA:1.20.5.1705.5E-9187224No hitNo description
CDDcd147023.19E-6188239No hitNo description
PROSITE patternPS000360190205IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.101.4E-4225257No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MEQKHVAMCS AAHSQLTSSS LFACAELKQS TSEFSLSEAL EFLDRSVIGQ EAADTQSHRD  60
EKFGEFRAHV RDRNFDDTEG LFGDVCAGDL FAFKSRDIMN GFSSSGELTE TLLCTQNHTP  120
KNSSISATMD SQSSICVGSP TSAAKPIAGD NQARGAESGS SGDQSDEDDL EIEAGPCGDS  180
TDPLDIKRIR RMVSNRESAR RSRRRKQAQL ADLEFQVEQL RGENSTLYRQ LTDASQQFRD  240
ADTNNRVLKS DVEALRAKVK LAEDMVARGS ITSSLNQILQ GHLGTPQQFN PHNLRGAAHV  300
SPTITIHGDE ARYAGMAVSG QNGGLGLGNA GMANSNLSNR IMSDTVSCVS DTW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199206RRSRRRKQ
2201206SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008219985.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008219985.10.0PREDICTED: basic leucine zipper 9
SwissprotQ9FUD34e-74BZIP9_ARATH; Basic leucine zipper 9
TrEMBLM5XPF80.0M5XPF8_PRUPE; Uncharacterized protein
STRINGXP_008219985.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.14e-53basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]