PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008218760.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 425aa    MW: 47127.1 Da    PI: 4.3989
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008218760.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.82.9e-2591411128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                     +p Gf+F+P+d+el+ +yL +kv+g++++ ++v++e+++y k ePwd+ +    +  ++ +++yfF+k +  + +g+r  r++ +g+Wk   k +
  XP_008218760.1   9 VPIGFKFRPSDDELLRYYLLNKVSGTPFKYSNVVPEFNLYgKKEPWDIWNdfggQNLEKGEDLYFFTKLKLVTGKGSRVARTIGNGTWKGEDKGT 103
                     589***************************9*******99456*****753444333356789**************************999999 PP

             NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +v +   k++  gl k + +   ++++ ++  W+mhey+l
  XP_008218760.1 104 TVRDPakKNTPLGLCKRFRYE--NEKSDQHGCWIMHEYSL 141
                     999886566679999**9998..44455699*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-315168IPR003441NAC domain
PROSITE profilePS5100529.8959169IPR003441NAC domain
PfamPF023658.2E-1810141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MAPCEYVDVP IGFKFRPSDD ELLRYYLLNK VSGTPFKYSN VVPEFNLYGK KEPWDIWNDF  60
GGQNLEKGED LYFFTKLKLV TGKGSRVART IGNGTWKGED KGTTVRDPAK KNTPLGLCKR  120
FRYENEKSDQ HGCWIMHEYS LHPSLVKPQS NSNTCGCDGK YVLCRIRKND RKRKLSENDG  180
VGGHALILQS PTKILRQLES SDEVVLGANS TPISKASEVT NHYNQQPEQT TTANAYLPMD  240
QPHYFLTDYP TTMASASTSP PPSLPQPDYG FELISDTDHQ PAQGAGFNYD LSQFLDSDDV  300
DALLKDLSNL DNIQPLTAQP LGGGSHPYPC TIEESAVDED SGNINTGLGI SSEDQTGGEL  360
GTENVSLNVS GFPVHDDEML DFLNRASFDD LVDMIQFEDN DDELQAFAKS ESVMGMESTT  420
TATTY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-12716613165Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008218760.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934100.0KT893410.1 Prunus persica cultivar Xiaobaitao NAC78 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008218760.10.0PREDICTED: protein CUP-SHAPED COTYLEDON 1-like
TrEMBLA0A314Z4270.0A0A314Z427_PRUYE; Protein CUP-SHAPED COTYLEDON 1-like
STRINGXP_008218760.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.13e-20NAC domain containing protein 86