PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00037146-RA
Organism
Pseudotsuga menziesii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family VOZ
Protein Properties Length: 277aa    MW: 31104.9 Da    PI: 4.5973
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00037146-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ179.31.7e-55981991102
               VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 
                       ppp+aflgpkcalwdc+rpaqg++w+qdycs fh tla neg+pg++pvlrp+gidlkdg+lfaalsak+q k vgipecegaa+akspwna 
  PSME_00037146-RA  98 PPPTAFLGPKCALWDCSRPAQGTKWCQDYCSDFHMTLASNEGAPGMRPVLRPRGIDLKDGPLFAALSAKTQEKAVGIPECEGAAAAKSPWNAY 190
                       89******************************************************************************************* PP

               VOZ  94 elfdlslle 102
                       elfd+ +le
  PSME_00037146-RA 191 ELFDMYVLE 199
                       *******98 PP
2VOZ136.71.8e-42198275129206
               VOZ 129 lpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkvskdsla 206
                       l dysgrgwhesrkqv+k+fgglkrsyymdpqps++fewhlyeyein++da+alyrlelk+v +kk++kgkv  d+l+
  PSME_00037146-RA 198 LEDYSGRGWHESRKQVIKDFGGLKRSYYMDPQPSTQFEWHLYEYEINDCDACALYRLELKMVYSKKNTKGKVGGDPLV 275
                       78************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
DFLVDDLHTP EKYFERVSIC TNIGEGLHQN SYPQTSVQLP ANIEHQENNN YVQTSEQLPP  60
NLVEGLEDYI PTAQPIFTLT GEEETSPVFN GSQPGLCPPP TAFLGPKCAL WDCSRPAQGT  120
KWCQDYCSDF HMTLASNEGA PGMRPVLRPR GIDLKDGPLF AALSAKTQEK AVGIPECEGA  180
AAAKSPWNAY ELFDMYVLED YSGRGWHESR KQVIKDFGGL KRSYYMDPQP STQFEWHLYE  240
YEINDCDACA LYRLELKMVY SKKNTKGKVG GDPLVYL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010657013.13e-98PREDICTED: transcription factor VOZ1
RefseqXP_019079230.13e-98PREDICTED: transcription factor VOZ1
SwissprotQ9SGQ02e-91VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA5CA221e-96A5CA22_VITVI; Uncharacterized protein
TrEMBLF6H4X23e-96F6H4X2_VITVI; Uncharacterized protein
STRINGVIT_12s0028g02670.t015e-97(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.27e-94vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]