PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf08155g00022.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | C2H2 | ||||||||
Protein Properties | Length: 124aa MW: 13824.4 Da PI: 8.9955 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.3 | 0.00012 | 8 | 30 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C++ F++ L H++ H Peinf101Scf08155g00022.1 8 YECVFCKRGFNTAQALGGHMNIH 30 99*******************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.160.60 | 3.5E-4 | 6 | 34 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
SuperFamily | SSF57667 | 1.41E-6 | 6 | 35 | No hit | No description |
PROSITE profile | PS50157 | 10.928 | 8 | 35 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 8.5E-6 | 8 | 32 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 10 | 30 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence Send to blast |
MRGIGRSYEC VFCKRGFNTA QALGGHMNIH RKDKARNKPS STHSLLNSKH EIQNSLTGAN 60 LRCYQQVSSY IPTYHEAVTD YSSCLTYFPA SSTSTDVHNR QCLNLFGDNW GMNLSLQFGA 120 AANN |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009625208.1 | 3e-35 | PREDICTED: transcriptional regulator SUPERMAN-like | ||||
Refseq | XP_016438285.1 | 5e-35 | PREDICTED: transcriptional regulator SUPERMAN-like | ||||
TrEMBL | A0A1S3XEJ4 | 1e-33 | A0A1S3XEJ4_TOBAC; transcriptional regulator SUPERMAN-like | ||||
STRING | XP_009625208.1 | 1e-34 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2136 | 21 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43540.1 | 1e-12 | C2H2 family protein |