PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf04561g00031.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HB-other
Protein Properties Length: 561aa    MW: 63544.7 Da    PI: 7.5254
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf04561g00031.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox52.96.2e-172175357
                              --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
                  Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                              kR   t+ q+e+Le+l+e+++yps e +++LA++ gLte+q++ WF+ rR k+k+
  Peinf101Scf04561g00031.1 21 KRIIKTRAQVEALEKLYEEHKYPSDELKADLAESSGLTEKQISGWFCHRRLKDKR 75
                              78999************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.3E-19375IPR009057Homeodomain-like
SuperFamilySSF466898.98E-161276IPR009057Homeodomain-like
PROSITE profilePS5007116.1311676IPR001356Homeobox domain
SMARTSM003892.7E-171880IPR001356Homeobox domain
CDDcd000866.17E-151975No hitNo description
PfamPF000461.4E-142175IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 561 aa     Download sequence    Send to blast
MEDLSEVHSE DDKGHTEKKF KRIIKTRAQV EALEKLYEEH KYPSDELKAD LAESSGLTEK  60
QISGWFCHRR LKDKRLSNGE IYANGRQDRS SGVIQDHGSG FRQDSCGSTK QVDDKKYDHR  120
EVESRRLTGP EFSTAEVTYD VGTHFRGKSN RMDDASSRSS SSLRNESFLQ NAESYDIATS  180
RYISQNLPTD YKGVKPKNGP SGYLKVKGQV ENAAITAVKK QLGRHYRLDG PPLGVEFDPL  240
PPGAFESSGA SPVNEPVPAC SPDMSNVYRR SNGYRSNSVT NSHDSDLDGS SFKRTKSAHP  300
EYCYNQKPER KSSEHNEYPE WNSPPGMYEG SARKMTNSHD SDLDGSSFKR TKSARPEYCY  360
NQKPERKSSE HNEYPEWNSP SGMYEGSARK MTNNSRENCK FTAKHGRAEI RTSTGSSHGI  420
GSPYDGKVNG EQVKPRFPSH SEVSRKVVEK DHFDCRRSEF KGSYYHNIGE RELPKIVEKD  480
NIMENRTAVD ENSLVRVKVP RHNETRVFKR PMNEVPDHRE YARASAIGVP LQSNHLMRTA  540
AEMPPNYSED EETEDSSSFE G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754500.0HG975450.1 Solanum pennellii chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018634553.10.0PREDICTED: uncharacterized protein LOC104120160 isoform X2
TrEMBLA0A1S4ACU00.0A0A1S4ACU0_TOBAC; uncharacterized protein LOC107796248
STRINGXP_009630181.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34362242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.11e-66HB-other family protein