PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03679g03027.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Nin-like
Protein Properties Length: 271aa    MW: 31788.3 Da    PI: 6.9576
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03679g03027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.67.9e-26159209252
                    RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                               +++++l++++++F+ pi++AAkeL v+lTvLK++CR+++I+RWPhRkiksl
  Peinf101Scf03679g03027.1 159 TDTLELDEIQRFFHVPITKAAKELRVGLTVLKKRCRELNIMRWPHRKIKSL 209
                               6899*********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.484146230IPR003035RWP-RK domain
PfamPF020421.4E-22161209IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MDSQSLNVLK VENQNDQFDW LYSEVEHLPS PFGTWQQDSR LSNGSLFNFE LDPYQFPNDV  60
QNTHLPFFGL EDFEEMIQEL GTFDIKLPPF QEDITMNPIN TMPLNMTSCH VEQFQDVTSI  120
MAGHDKHYYQ ISETKLISSG SNKDFTKRNY NNSGRQKKTD TLELDEIQRF FHVPITKAAK  180
ELRVGLTVLK KRCRELNIMR WPHRKIKSLQ SLIDNVKEMG LASSEVKMLE EHQRMLEKVP  240
EMELTERTKK LRQACFKANY KKRRAMAAAL F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016448453.11e-123PREDICTED: protein RKD2-like
TrEMBLA0A1S3Y9101e-122A0A1S3Y910_TOBAC; protein RKD2-like
STRINGXP_009589276.11e-118(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA121431922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.16e-44RWP-RK domain-containing protein