PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf03659g01009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | G2-like | ||||||||
Protein Properties | Length: 250aa MW: 28552.3 Da PI: 9.6329 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 104.2 | 7.8e-33 | 31 | 85 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHe+Fv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl Peinf101Scf03659g01009.1 31 KPRLRWTADLHEHFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 85 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.637 | 28 | 88 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.0E-31 | 28 | 86 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 4.12E-16 | 31 | 88 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 8.6E-24 | 31 | 86 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.9E-8 | 33 | 84 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 5.5E-10 | 130 | 154 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MYNASELGGG SGFMYENGNG EGGIVMTRDP KPRLRWTADL HEHFVDAVTK LGGPDKATPK 60 SVLRLMGLKG LTLYHLKSHL QKYRLGQQAK KQNAADHNKE NSGKGLVWTF QFAFHRPQYL 120 FTQYELYARV QQKLQMRIEA QGKYLQAMLE KAQKNLPVSM NSPSALEATR AQHFNLPLSN 180 ITDHLHGDNR DDTIMGKRIY DNTMDELPRS DYFKEEDQKR DMNLKLKEAS ITFDLNSRSS 240 YDFFGANTAV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 3e-19 | 31 | 84 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 3e-19 | 31 | 84 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 3e-19 | 31 | 84 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 3e-19 | 31 | 84 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019247845.1 | 1e-112 | PREDICTED: myb family transcription factor PHL11 isoform X1 | ||||
Swissprot | C0SVS4 | 5e-59 | PHLB_ARATH; Myb family transcription factor PHL11 | ||||
TrEMBL | A0A1J6ID59 | 1e-111 | A0A1J6ID59_NICAT; Myb family transcription factor phl11 | ||||
STRING | Solyc08g076010.2.1 | 1e-101 | (Solanum lycopersicum) | ||||
STRING | XP_009617645.1 | 1e-102 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4416 | 21 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45580.1 | 1e-58 | G2-like family protein |
Publications ? help Back to Top | |||
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