PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf03112g00007.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Trihelix

Protein Properties

Length: 289aa MW: 32212.2 Da PI: 10.7465

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf03112g00007.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	39.1	2e-12	2	70	20	86
trihelix 20 rlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +l+rg+lk+++W+ev++ + r++ +s +qCk++++ ++k+yk +k+ + + + s++p+f++l+ Peinf101Scf03112g00007.1 2 ELSRGNLKQKHWKEVADIVssreDYRKVPKSDIQCKNRIDTVKKKYKLEKAKIGAG--QGPSKWPFFEKLD 70 57899************8766667888999******************98..56668****98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	1.0E-16	5	72	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence Send to blast
MELSRGNLKQ KHWKEVADIV SSREDYRKVP KSDIQCKNRI DTVKKKYKLE KAKIGAGQGP 60 SKWPFFEKLD HLIGSTAKIN STMSAGVGSA GVGSSNLFSQ KVPMGIPMGV RSLPQLRQHQ 120 QQKQKQPLRR RRHMDSDTSE SESEPDLSPD SADSLPPQSF KRPRVQGMQG GGIGEASGKG 180 GGSGSGKGNN WGSSLRELTK AILRFGEAYE QAETAKVQQM VEMEKRRMEF TKEMELQRMQ 240 FFMNTQLELS QLKPNRRVGN SNHRSNSNHR SNNNASAANH NNNNSDSSI

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269\|PubMed:21330492}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019227077.1	1e-121	PREDICTED: trihelix transcription factor ASIL2
Swissprot	Q9LJG8	1e-79	ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBL	A0A1J6J9B1	1e-120	A0A1J6J9B1_NICAT; Trihelix transcription factor asil2
STRING	XP_009770839.1	1e-120	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10332	18	23

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	4e-42	sequence-specific DNA binding transcription factors