PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03060g00026.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 360aa    MW: 41002 Da    PI: 9.1674
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03060g00026.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.82e-13230305488
                               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS. CS
                        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr. 87 
                                +++++  ++  l+lp  fa+++g+++++  +++l de+ rsW v l    +  +   t+GW +F ka+g+++gD+  F+l+++ 
  Peinf101Scf03060g00026.1 230 STIKPYIITNTVLYLPMAFAKSNGLINRN--EMILVDEKRRSWFVHL----G--Q---TDGWTQFMKAHGVQVGDSNKFELINNg 303
                               456889999999************99655..8***************....2..2...68********************99653 PP

                               .S CS
                        B3  88 .s 88 
                                +
  Peinf101Scf03060g00026.1 304 tD 305
                               34 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010190.0383183IPR003340B3 DNA binding domain
CDDcd100176.08E-983155No hitNo description
SuperFamilySSF1019364.32E-884160IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.4E-795162IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508636.23199178IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.105.2E-15220303IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019368.44E-16221304IPR015300DNA-binding pseudobarrel domain
CDDcd100172.00E-11226304No hitNo description
PROSITE profilePS508638.769227317IPR003340B3 DNA binding domain
SMARTSM010193.3E-11227316IPR003340B3 DNA binding domain
PfamPF023626.4E-12229310IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
QLKHYKCTGS ITKFDSPRIF ASSSKDFRRA EASTHNHFGH CNVEFIVKSY CLSSGHFVSL  60
QTYLPLTFQE SFIFLIGVIY GKYMKHMKCA NRYKPFQRLP KDFAMANGLT NKTCGLIIKD  120
ERQRSWNFRL YTFCSNVYVG GKWVFCIAND LQVGDRIRCE PEVKKNNLET KSQVPAPRIS  180
NKGLHFQEQI DLKIMKEQID LKIMTSDVTA PKSQVPASTS SDEANPYFIS TIKPYIITNT  240
VLYLPMAFAK SNGLINRNEM ILVDEKRRSW FVHLGQTDGW TQFMKAHGVQ VGDSNKFELI  300
NNGTDDTKPI THFYCERFDN ASILERMTSI TEAIDMIKQG YVIGCLGASS NGTFSVASAW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32215171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.12e-17B3 family protein