PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf02695g00029.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

C2H2

Protein Properties

Length: 759aa MW: 82788.5 Da PI: 4.6212

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf02695g00029.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00031	54	75	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C+ F ++ n+krHir+H Peinf101Scf02695g00029.1 54 KCEKCSLEFCSPINYKRHIRLH 75 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence Send to blast
IPVGKLRSGA LDAMKGDEGG HPAQMAQWLD SLDQQGADIT GLPFLKKSKV QMQKCEKCSL 60 EFCSPINYKR HIRLHHRSVN FDKESRKYRD LLGAFWDKLS VDEVKEVVSL QDISLKEIAG 120 SSLVHALSTA LGKPGFWNLP RVYVKAGSKL LEVIQAKPWP VTSQELFSIL DDASEGTFLC 180 AATAESVQKY VFDGEAAKIG LDPMNLIACT SFLFEQKLIK AWAADKDAEA LRCQKSLFEE 240 EEAAKKKQAG KLEKKKLKKL RQKEQKARVQ LNEEEVNREV PADSFKVPSP EVSSLPAPSQ 300 ELLNKQEGNL EVPADSSESP SPEVSSLPAP SRELLNEQEG NLEVPADSSE VPSPEVSSLP 360 APSGELLNEK EGNLEVPADS LEVPSPEVSS LPAPSQELLN EQEGNLEVPA DSLEVPSPEV 420 SSLPAPSQEL LNKQEGNLEV PADSLEVPAD SSEVPSPEVS SLPAPSRELS NEKEGNLEVP 480 ADSLEVPSPE VSSLPAPPRK LSNENEGNLE VQFSSNEDMG VESKYDLCLQ YVDVVRVQNV 540 ESQPVPVSVR RRFPYAQWQA SDQSGFHNNQ NHPALKGEPI QKHKDSGGPV NSNKIWTREV 600 RVESDDASIP EVPKEAIDQQ QSSHELMIGS LSIPVRDCST QSAEARDDFE NALQGLEWSP 660 AALKAILRRR WNEALAGDHV ILTLSPDTES SGQPDVPTSS SSEAAPVSDG KEHGIVSTAD 720 DQPAKSEVLN SSSSGNSVVK NRRKPGKGTK TKYIRKQKK

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence Send to blast

IPVGKLRSGA LDAMKGDEGG HPAQMAQWLD SLDQQGADIT GLPFLKKSKV QMQKCEKCSL  60
EFCSPINYKR HIRLHHRSVN FDKESRKYRD LLGAFWDKLS VDEVKEVVSL QDISLKEIAG  120
SSLVHALSTA LGKPGFWNLP RVYVKAGSKL LEVIQAKPWP VTSQELFSIL DDASEGTFLC  180
AATAESVQKY VFDGEAAKIG LDPMNLIACT SFLFEQKLIK AWAADKDAEA LRCQKSLFEE  240
EEAAKKKQAG KLEKKKLKKL RQKEQKARVQ LNEEEVNREV PADSFKVPSP EVSSLPAPSQ  300
ELLNKQEGNL EVPADSSESP SPEVSSLPAP SRELLNEQEG NLEVPADSSE VPSPEVSSLP  360
APSGELLNEK EGNLEVPADS LEVPSPEVSS LPAPSQELLN EQEGNLEVPA DSLEVPSPEV  420
SSLPAPSQEL LNKQEGNLEV PADSLEVPAD SSEVPSPEVS SLPAPSRELS NEKEGNLEVP  480
ADSLEVPSPE VSSLPAPPRK LSNENEGNLE VQFSSNEDMG VESKYDLCLQ YVDVVRVQNV  540
ESQPVPVSVR RRFPYAQWQA SDQSGFHNNQ NHPALKGEPI QKHKDSGGPV NSNKIWTREV  600
RVESDDASIP EVPKEAIDQQ QSSHELMIGS LSIPVRDCST QSAEARDDFE NALQGLEWSP  660
AALKAILRRR WNEALAGDHV ILTLSPDTES SGQPDVPTSS SSEAAPVSDG KEHGIVSTAD  720
DQPAKSEVLN SSSSGNSVVK NRRKPGKGTK TKYIRKQKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	252	259	EKKKLKKL
2	742	758	RKPGKGTKTKYIRKQKK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019246163.1	1e-143	PREDICTED: uncharacterized protein LOC109225837
TrEMBL	A0A1J6IYH1	1e-142	A0A1J6IYH1_NICAT; Uncharacterized protein
STRING	XP_009758251.1	1e-141	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3722	21	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	3e-70	C2H2-like zinc finger protein