PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01969g02004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 449aa    MW: 49845 Da    PI: 5.052
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01969g02004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000267797323
                              ETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                              C+ Cgk F +   L  H++tH
  Peinf101Scf01969g02004.1 77 CKECGKEFGSMRALAGHLKTH 97
                              ********************9 PP
2zf-C2H217.11.6e-05106128123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               y+C++C+k F +   L  H+++H
  Peinf101Scf01969g02004.1 106 YVCEKCDKGFGSMRALFGHMKVH 128
                               9********************99 PP
3zf-C2H211.80.00074362384123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++Cp+C k+F++  +L  H r H
  Peinf101Scf01969g02004.1 362 HECPICFKVFPSGQSLGGHKRAH 384
                               79**************9999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.61675102IPR007087Zinc finger, C2H2
SMARTSM003550.167597IPR015880Zinc finger, C2H2-like
SuperFamilySSF576672.46E-976128No hitNo description
PfamPF139128.0E-67799IPR007087Zinc finger, C2H2
PROSITE patternPS0002807797IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.604.6E-47798IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
Gene3DG3DSA:3.30.160.601.1E-4104130IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.4E-4106130IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.344106133IPR007087Zinc finger, C2H2
SMARTSM003556.1E-4106128IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280108128IPR007087Zinc finger, C2H2
SuperFamilySSF576676.24E-5359386No hitNo description
PfamPF139128.5E-11362385IPR007087Zinc finger, C2H2
PROSITE profilePS501579.141362384IPR007087Zinc finger, C2H2
SMARTSM003550.2362384IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280364384IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MRVHLALIQA SKKQKYKAVG KMDSEEFESS LKDQEKANNG ISIGNDDDGE LNGYGLRDNP  60
RKSWRVTDIT GCSLNLCKEC GKEFGSMRAL AGHLKTHSKK CSGKSYVCEK CDKGFGSMRA  120
LFGHMKVHSK RSRAVEDDQD CETKQVLPDF ETVCPIRKKR SKIRYNIDAH CTSFSSLNNE  180
SVSGVSELDE MEEAAKCLMM LSLGVREWDE YVLASEYLKN ENAILESESF HCAKGISEKI  240
GGSDSDSDSD SVDSYEKNCD EGVSVDELFT VNDEFSNKLM LINTENDPSS SVVMEDIAFL  300
DSCSYKNAAG VDFHGLICDT TGHKTLVNSE TLLADMVNSQ LECIDDSPVE LIRPKPIKSK  360
KHECPICFKV FPSGQSLGGH KRAHYTGFIE GKTKEAVVKK LEDLADNHKG FDLNNPVNVV  420
DERGDKDVVE LKLWWVGNDQ GAEALMMTS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015064902.11e-160zinc finger protein ZAT1-like
TrEMBLA0A3Q7FX211e-156A0A3Q7FX21_SOLLC; Uncharacterized protein
STRINGSolyc02g088670.1.11e-157(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA69272231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26590.11e-14C2H2-like zinc finger protein