PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01758g00006.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 283aa    MW: 31883.1 Da    PI: 6.176
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01758g00006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.6e-09122168355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + h  +Er+RR+   + f+ L + +P +     kKl   +iLe A++YI +Lq
  Peinf101Scf01758g00006.1 122 QDHLLAERKRRESFTQLFAALAKSIPDL-----KKLQ-PSILEDAIKYIEQLQ 168
                               668899**********************.....5654.88************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.6119167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-6122168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.9E-11123179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.70E-7124172No hitNo description
SuperFamilySSF474591.96E-10124180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-6125173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MENTSFNNLE NNIGREAPFE FKNLLSEMFS SFPNQNPSRS PLEHGNTIVK EASKAAFPSS  60
PPSTPNPSSS HNIISFGNPA KSNYFLGDEQ DYDMMSVEKV MRLSSSSTSM AKRICRSPLQ  120
SQDHLLAERK RRESFTQLFA ALAKSIPDLK KLQPSILEDA IKYIEQLQER IRDLEEGIKQ  180
NLNIESTNID ESKPENEIKV QFVHKNVLIG VHCSKTRRSI LSIIAGTMEK LRLTIHNIRV  240
TPCNHTALNI SIFSEVDQDV DISVQDVEKA FELAFLSTPN MAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127132ERKRRE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009623662.11e-103PREDICTED: transcription factor bHLH18-like
RefseqXP_016434421.11e-103PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1S3X3M01e-102A0A1S3X3M0_TOBAC; transcription factor bHLH18-like
STRINGXP_009623662.11e-103(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125981122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.11e-17bHLH family protein