PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01556g05030.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 492aa    MW: 54883.3 Da    PI: 8.1081
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01556g05030.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.0001297116221
                               EETTTTEEESSHHHHHHHHH CS
                   zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                               +C+ CgksF ++  L  H++
  Peinf101Scf01556g05030.1  97 VCKECGKSFQSWKALFGHMK 116
                               6******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139121.2E-6832IPR007087Zinc finger, C2H2
SMARTSM003551.5931IPR015880Zinc finger, C2H2-like
SuperFamilySSF576676.41E-9931No hitNo description
PROSITE profilePS501578.808931IPR007087Zinc finger, C2H2
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SuperFamilySSF576676.41E-991118No hitNo description
PROSITE profilePS5015710.22196123IPR007087Zinc finger, C2H2
SMARTSM003550.007896118IPR015880Zinc finger, C2H2-like
PfamPF139122.0E-898120IPR007087Zinc finger, C2H2
PROSITE patternPS00028098118IPR007087Zinc finger, C2H2
PfamPF139121.0E-11326349IPR007087Zinc finger, C2H2
SuperFamilySSF576671.11E-5326348No hitNo description
SMARTSM003550.063326348IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.074326353IPR007087Zinc finger, C2H2
PROSITE patternPS000280328348IPR007087Zinc finger, C2H2
SuperFamilySSF576671.11E-5396423No hitNo description
PfamPF139123.1E-10401424IPR007087Zinc finger, C2H2
SMARTSM003550.19401423IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.787401423IPR007087Zinc finger, C2H2
PROSITE patternPS000280403423IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
MGEDQEPRHV CKFCYKSFPC GRSLGGHMRS HMINSTDGRS SKKMLPSLIS NGNLDKGTEA  60
AGDQSGSINY VLRENPKKTS KFAESSEDTL LPNQNKVCKE CGKSFQSWKA LFGHMKCHSE  120
RISSMNNNSV EEGSWNSANH KQELMDSQSD TEAAAPNKKK RSSRKMKRYM ATNTTSSSLT  180
FNASPCVSDI EHELQEEVAM SLILLSRDVG NWVGQNHVTE CSDNNYQSQK VGIKSTKCKD  240
VDLVDLKKVK IGKTEQGESS KSNSKMFGMS SNGQKRDNSD VPTAEKKKKI KVDNENRVVE  300
ELVKGSGLVM SNMSSDLKEN SSKMNFECTT CNKSFHSYQA LGGHRASHKN NKGENSNIDS  360
EHLQNQDTDH VKNCSNESAI NELGEKNIET NSGSKKLSKM HECPICFKIF PSGQALGGHK  420
RSHLIAEAKR NNNQAVEIQK PMPEIRNFLD LNLPAPVEEE NMLDSSSENV GFQQWWMENS  480
HKHEQLMGLL SN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009623743.10.0PREDICTED: zinc finger protein ZAT9-like
RefseqXP_016438592.10.0PREDICTED: zinc finger protein ZAT9-like
TrEMBLA0A1S3XFD40.0A0A1S3XFD4_TOBAC; zinc finger protein ZAT9-like
STRINGXP_009623743.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44812241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.11e-27C2H2-like zinc finger protein